Gene Phep_2101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2101 
Symbol 
ID8253206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2422795 
End bp2423334 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content41% 
IMG OID644935750 
Producthypothetical protein 
Protein accessionYP_003092368 
Protein GI255531996 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.306871 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTT TAAAAAGAGT ATTATTTGTT ATTGTCGGGA TTGTTATTCT GGCATTGGTA 
GTAGCGCTGT TTGTGAAAAA AGATTATGCG GTGGAGCGTG AAGTAACCAT CAACAGGCCG
GAACCAGAGG TATTCGACTT CATTAAACAC ATTAAAAATC AGGACCAGTA CAGCGTTTGG
AACAACCTGG ACCCGGCCAT GAAAAAGAGT TACAGCGGCA CCGATGGCAC AGTTGGCTTT
AAATATTCAT GGGAAAGCAC CAACAAAAAT GTAGGTAAGG GCGAACAGGA AATCGTCAAA
ATTACTGAAG GCGACAGGAT AGACATGAAA TTGCGCTTTA AAGAACCTTT TGATGCAGAA
GACGATGCTT ATATGACCAC AGAGGCCATT GGCGCTGATA AAACAAAGGT TAAATGGGGC
TTTACAGGTA AAATGGCCTG GCCCATGAAT TTAATGATGC TTTGTATGAA GATGGAAGAG
ATGATTGGCA AAGATCTGCA GAGTGGATTG GACAAAATGA AAACCACGCT GGAAAAGTAA
 
Protein sequence
MKILKRVLFV IVGIVILALV VALFVKKDYA VEREVTINRP EPEVFDFIKH IKNQDQYSVW 
NNLDPAMKKS YSGTDGTVGF KYSWESTNKN VGKGEQEIVK ITEGDRIDMK LRFKEPFDAE
DDAYMTTEAI GADKTKVKWG FTGKMAWPMN LMMLCMKMEE MIGKDLQSGL DKMKTTLEK