| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2080 |
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| Symbol | |
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| ID | 8253184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2398918 |
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| End bp | 2400291 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644935728 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003092347 |
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| Protein GI | 255531975 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0104067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.366822 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACTTA TAAAATACAT CATCTTCTCA TTTTTACTGA GCACCCTCAG CTCCTGCGAG
AAGTTTTTAA CTACAGAACC CGTAAATGCG GTATCGGATG AAAACCCGAT CTACGATAAA
GGATCAAGCG AAACTGCCTT AAGGGCTGTT TACAGACAAA TGGGCAATAT CGGTTATTAT
GGCGAAACCT ATGTAACTTT TGGCTATTTC CCCAGTGGGG ACATTAAAAA CCTGACCACA
GGTGGTTCTG CCAACCTGGT CAATGTAAAT TTCAGAACGG ATGAGGTGTT TTTCAACACG
GCCTGGATTG CCATTTACAA CACCATTAAC CGGGCCAACC AGGTAATCAG TAAAGTGCCG
GGCGTAAACG ATCCTTTATT GACACCGGCA CTTAAAAACC AATACATTGG CGAGGCTAAA
TTCATAAGGG CACTGGCGTA TTTTGACCTG GCCAGGGCCT GGGGTGGTGT TCAGCTGATC
CTGGAACCTA CAATATCACT GGAAAACCGG CCCAAAGTGA AAAGAAGTAC ACTAGCCGAG
ACCTATGCGC AGGTACAGAA AGACCTGGAA GATGCTGAAG TACTGCTGCC TGATGTTGTA
AACCGAATCA GGGCTACCAG GCGTACCGTT TGGGCCCTAA GGGCCAGACT GCACCTTTAT
AAGCAGGAAT GGGCACTGGC CGAAGAATAT GCCACCAGGT TAATCGATAA AACAGCCGAT
TATACGCTGG TAAAACCTTT TAGTGCCTGG TTTGCGAATA ATGTAACAGC CAGCAGGGAA
TCCATTTTCG AATTGCAGTA CAGTGTGATC AATCCAAATG CCATCCGTAT CCAGATGCAG
CACTCTACCA ATGGAGGGCA GTACCGCTAC GCACCGAACG ACAGGTTTGT ACAGCTGCTG
AATGATCCTG CCGTATCGGG TGGAAGGAGT GCCCTTATCG GTAGTGTTAC ACAAAGTGGC
ATCACCAATT GGTTTGGCAA TTTGTATTAC AGGAAAGACG CTACAGATCC CACCTACATT
TTCAGGATTG CAGAGATGTA TCTCATCCGC GCAGAAGCAA GGGCCCAGCT CAATAATCTA
TCGGCCACCA GCGGAGCGCT GTCCGATCTG AACCAGGTGC GTGACCGTGC AGGTATTTTA
CCTTCAACGG CAGCAGGAAA AGACCAGATC TTACTGGCTA TAGAAAATGA ACGCCGTATA
GAATTTGCCT GGGAAGCACA CCGTTGGTTC GACCTGGCAA GAACCGGTCG TGCCAAAGTG
GTGCTCGAAG CATTGGATCC CAATACCAAG GTGTCAGCGC ACGAATATGT TTTCCCGATA
CCGGTAACAC AGATCCAGCT GGATCCAAAC CTGGAACAAA ACAAAGATTA TTAA
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| Protein sequence | MKLIKYIIFS FLLSTLSSCE KFLTTEPVNA VSDENPIYDK GSSETALRAV YRQMGNIGYY
GETYVTFGYF PSGDIKNLTT GGSANLVNVN FRTDEVFFNT AWIAIYNTIN RANQVISKVP
GVNDPLLTPA LKNQYIGEAK FIRALAYFDL ARAWGGVQLI LEPTISLENR PKVKRSTLAE
TYAQVQKDLE DAEVLLPDVV NRIRATRRTV WALRARLHLY KQEWALAEEY ATRLIDKTAD
YTLVKPFSAW FANNVTASRE SIFELQYSVI NPNAIRIQMQ HSTNGGQYRY APNDRFVQLL
NDPAVSGGRS ALIGSVTQSG ITNWFGNLYY RKDATDPTYI FRIAEMYLIR AEARAQLNNL
SATSGALSDL NQVRDRAGIL PSTAAGKDQI LLAIENERRI EFAWEAHRWF DLARTGRAKV
VLEALDPNTK VSAHEYVFPI PVTQIQLDPN LEQNKDY
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