Gene Phep_2074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2074 
Symbol 
ID8253178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2392642 
End bp2393019 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content40% 
IMG OID644935722 
Producttranscription elongation factor GreA/GreB domain protein 
Protein accessionYP_003092341 
Protein GI255531969 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.175013 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACAA AATCCTTATC ATTGTCAAAA AGTGATTTCA AACTTTTAAA AGAACACCTG 
GAGAAATCCA ACATGAGTGC TTATAACAAA GAAAAATTAC AGGCAGAACT TAAAGCCGCT
ACCATCTATA CTGAAGAAGA GCTGCCCTCG GATGTAGTTT GCTTAAAATC GGAAGCCAGG
ATCGCAAATG TAAAAACGGG AAAAGAGTTT ACCTTTAAAC TCGTGATGCC GGAAGAGGCA
AATATAAAAG CACAGAAAGT ATCGGTTTTT GCACCCATTG GCATTGCACT ATTTGGTTAC
AGGACCGGCG ACAGCATCAA CTGGGAGATG CCTGACGGCA TTCAGGAGTT TAAAATACTG
GAAGTTAACA GGCTATAA
 
Protein sequence
METKSLSLSK SDFKLLKEHL EKSNMSAYNK EKLQAELKAA TIYTEEELPS DVVCLKSEAR 
IANVKTGKEF TFKLVMPEEA NIKAQKVSVF APIGIALFGY RTGDSINWEM PDGIQEFKIL
EVNRL