Gene Phep_2058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2058 
Symbol 
ID8253162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2374718 
End bp2375053 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content38% 
IMG OID644935706 
ProductTPR repeat-containing protein 
Protein accessionYP_003092325 
Protein GI255531953 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0442848 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAGTA CCCGAATAGC AAAGTTATTG GAGTTTTTAC AGAGTGATCC GAATGATCCT 
TTCGTATTGT ATGCACTGGC AACAGAATAT AATACCTCAA ATGATACGGA AAAAGCACTT
GAATATTATT TGAGGCTAAC CACTGATCAT CCTGATTATG TGGGTACCTA TTACCATTTA
GGTAAACTTT ATGAACAGCT GCAGCAAACA GAAAAAGCAA TTGAAATTTA CCAGAAAGGA
ATGCTGGCTG CAAGGAATAA ACGGGATATG CATGCTTTTT CTGAACTGCA GGGTGCTTAT
AATTCTGCCG CAGGTTTAGA TTACGAAGAT GATTAA
 
Protein sequence
MQSTRIAKLL EFLQSDPNDP FVLYALATEY NTSNDTEKAL EYYLRLTTDH PDYVGTYYHL 
GKLYEQLQQT EKAIEIYQKG MLAARNKRDM HAFSELQGAY NSAAGLDYED D