Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2058 |
Symbol | |
ID | 8253162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 2374718 |
End bp | 2375053 |
Gene Length | 336 bp |
Protein Length | 111 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644935706 |
Product | TPR repeat-containing protein |
Protein accession | YP_003092325 |
Protein GI | 255531953 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0442848 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAAGTA CCCGAATAGC AAAGTTATTG GAGTTTTTAC AGAGTGATCC GAATGATCCT TTCGTATTGT ATGCACTGGC AACAGAATAT AATACCTCAA ATGATACGGA AAAAGCACTT GAATATTATT TGAGGCTAAC CACTGATCAT CCTGATTATG TGGGTACCTA TTACCATTTA GGTAAACTTT ATGAACAGCT GCAGCAAACA GAAAAAGCAA TTGAAATTTA CCAGAAAGGA ATGCTGGCTG CAAGGAATAA ACGGGATATG CATGCTTTTT CTGAACTGCA GGGTGCTTAT AATTCTGCCG CAGGTTTAGA TTACGAAGAT GATTAA
|
Protein sequence | MQSTRIAKLL EFLQSDPNDP FVLYALATEY NTSNDTEKAL EYYLRLTTDH PDYVGTYYHL GKLYEQLQQT EKAIEIYQKG MLAARNKRDM HAFSELQGAY NSAAGLDYED D
|
| |