Gene Phep_2052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2052 
Symbol 
ID8253156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand+ 
Start bp2368836 
End bp2369369 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content42% 
IMG OID644935700 
Producthypothetical protein 
Protein accessionYP_003092319 
Protein GI255531947 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.711886 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00461216 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGGAAAT ATCTGGCAGT AATGCTCATC ACAGGGATAG TTTCCTGCAC CAATACAGAA 
AAGAAAGTAG CAGGGAATTC GGATACTACA TCGGGCGTTG TTGATACCAT CGCTAATCAT 
ATTGAACTGA AGGACAATAA AGTCCAGGCT ATTTACAATG GTTATATCGC TTTGAAAGAT 
GCACTGGTTG CTGCAAAATT TGAGGACGCA CAAAAGACTG CCGCAGTGCT TAAAACCGAT 
CTGGCCGCTT ATAAAGGTTG TGAAAGCACA GCTTTAACTG CCGAAAAAAT TGCTGTTGCA 
AAGGATATTA AAAACCAGAG GGCCTTGTTT ACATCCCTGA GTGAAGATGT AATCGCCTTA 
TTTAAACATG CAGACCTGAT TAAAGGGAGC ATTTTTGTAC AGCATTGCCC AATGGCCAAT 
AATGGCGTTG GGGGCGACTG GCTTGCTTCG GAAAAGAAAA TACAGAACCC TTATTATGGA 
GATGAAATGA TGGATTGCGG AAGGGTTGTG GAAGAGATCA GAACTGGTAA GTAA
 
Protein sequence
MRKYLAVMLI TGIVSCTNTE KKVAGNSDTT SGVVDTIANH IELKDNKVQA IYNGYIALKD 
ALVAAKFEDA QKTAAVLKTD LAAYKGCEST ALTAEKIAVA KDIKNQRALF TSLSEDVIAL 
FKHADLIKGS IFVQHCPMAN NGVGGDWLAS EKKIQNPYYG DEMMDCGRVV EEIRTGK