| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2026 |
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| Symbol | |
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| ID | 8253130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2335069 |
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| End bp | 2336331 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644935674 |
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| Product | ABC transporter related |
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| Protein accession | YP_003092293 |
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| Protein GI | 255531921 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.476742 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0046378 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTAACC TGATGCTAAA AGCAGAAAAC ATATCAAAAT ATTACCGACT GGGCGTAATA
GGATCCGGAT CATTTAAAGA AGATCTCCAA AACCTCTGGA AGAAAACATT TTCAATTGGC
AATAATACAG CAACGAACGA CCTCCATATC GACAAAGGAA AAGAACTATG GGCGCTTAAA
GACATTAATT TTGAGATAAT GAAGGGCGAC GTGGTCGGCT TTGTTGGCAA AAACGGAGCT
GGAAAATCAA CCCTGTTGAA AGTACTGTCG CGCATTACGC TACCAACAAC CGGCACCATT
AAAGGCAAGG GCCGCATTGC AAGTTTATTG GAAGTTGGCA CAGGCTTCCA TTTAGAGTTG
ACAGGCCGCG AGAACATCTT TTTAAATGGG CAAATTTTGG GTATGCACAA AAAAGAGATC
ATAGCTAAAT ATGACGAAAT TGTAGCTTTT TCCGGTATTG AGCGATTTCT GGATACTCCT
GTAAAACGCT ACTCCAGCGG GATGTACGTT CGGCTTGCAT TTGCCATAGC TGCGCATTTG
GATCCCGAAA TCCTCATCGT TGATGAGGTA TTAGCTGTGG GTGATGCTGA ATTTCAGAAA
AAATGCCTGG GTAAAATGAA ACAGGTGTCG ACAGAAGAAG GCAAAACTGT ACTTTTTGTA
AGCCATAATT CGCAAGCGCT AAAAAGCTTA TGTACCAAAG CAATCTACCT TGAAAAAGGG
CGGCTAATTG ATATGGGAAA TATGCAAGAT GTAATAGGCA ATTATTTAAA GCGTGAGCAA
ACATTATATC TAAGCAGGAT ATACGATGAC CCTGACACTG CGCCAGGAAA TGAAAGTGTC
CGTATCAAAC GTGTCGAAAT GTTGCCACAA TATCCCGATT CCAGCAATAT CATAGACATC
AGAACACCTC TGCTCATCGA ATTCGAATTT TGGTATTTAC CAGCGGAAGA AATGGATCTG
GGTGTAAACA TTATATTAAA CACCGTAATG GGAGAATGTG TTTTTAATGT CGCCTCAACT
TCAAAGCAAT ATACCAAGGG GGTAATTAAA GGGAAATGTA CTATACCTGG CGACTTTCTG
AATAATGGGT CCTATTCCAT AGACCTGTCA TTTGTTAAAA ACACCAGCAG TCCATTGTTT
GATTTTGAAG AATGCTTATC TTTTGAAGTG GAGGACTTTA GGGAGAATAC GGCATGGTAT
GGCGACTGGG TTGGCTCGGT TAGGCCAAAG TTTAAAGTAC AACTGCAACA AGACAACTTT
TAA
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| Protein sequence | MSNLMLKAEN ISKYYRLGVI GSGSFKEDLQ NLWKKTFSIG NNTATNDLHI DKGKELWALK
DINFEIMKGD VVGFVGKNGA GKSTLLKVLS RITLPTTGTI KGKGRIASLL EVGTGFHLEL
TGRENIFLNG QILGMHKKEI IAKYDEIVAF SGIERFLDTP VKRYSSGMYV RLAFAIAAHL
DPEILIVDEV LAVGDAEFQK KCLGKMKQVS TEEGKTVLFV SHNSQALKSL CTKAIYLEKG
RLIDMGNMQD VIGNYLKREQ TLYLSRIYDD PDTAPGNESV RIKRVEMLPQ YPDSSNIIDI
RTPLLIEFEF WYLPAEEMDL GVNIILNTVM GECVFNVAST SKQYTKGVIK GKCTIPGDFL
NNGSYSIDLS FVKNTSSPLF DFEECLSFEV EDFRENTAWY GDWVGSVRPK FKVQLQQDNF
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