Gene Phep_2009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2009 
Symbol 
ID8253113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2317546 
End bp2318127 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content46% 
IMG OID644935657 
Producthypothetical protein 
Protein accessionYP_003092276 
Protein GI255531904 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.471756 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00189164 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGAAGT TAAATAAAAG ATTTTGGTAT CTGTTGAGGA TTGATATCAT CAGGTACTTG 
TTTATCCTGC TGTTTTTATA TGCAGCATTT AGTAAAGTTT GGGACTTTCA GAAGTTTAAG
GTGCAGCTGG GGCAATCGCC TATATTATCA GATTTTACTT TGCTGGCTGC CTTGTGTATC
CCTGCGGTTG AGATTTTGAT TGCTATAGGT TTGGCGTTTA AACGGACCTT ATTGCCGGCC
CTTTGGGCCA GCTATGGCTT GATGATCATG TTTAGCTTGT ACATCATAGT GATTTTGAAG
TTCAGTGACC GGCCGGTTTG CCATTGTGGT GGTGTTTTGG AACAGATGCA ATGGTCGGAA
CATTTGTGGT TTAATGTAGG GTTTGTGGGG TTGGGGATAT TAGGGTTGTG GCTGGGGTTT
TACCGCCGGT TTCGTGATGC TGGTACGTCG CGTCATCTCG AACCGCGGGG AGAGATCTCT
TGTTTAGGCA TAGTTCAAGA GATCCCTCGT CGCTGCGCTT CCCTCGGGAT GACGGGGTGT
GTTAAGGACG ACCGCTTTAG GCATGACGAC GAGGTGTGTT AA
 
Protein sequence
MKKLNKRFWY LLRIDIIRYL FILLFLYAAF SKVWDFQKFK VQLGQSPILS DFTLLAALCI 
PAVEILIAIG LAFKRTLLPA LWASYGLMIM FSLYIIVILK FSDRPVCHCG GVLEQMQWSE
HLWFNVGFVG LGILGLWLGF YRRFRDAGTS RHLEPRGEIS CLGIVQEIPR RCASLGMTGC
VKDDRFRHDD EVC