Gene Phep_1992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1992 
Symbol 
ID8253096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2300945 
End bp2302303 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content36% 
IMG OID644935642 
Producthypothetical protein 
Protein accessionYP_003092261 
Protein GI255531889 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.376684 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000060714 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACATA AATTTGAAAA ATTATTCTTC TTTTCATTGA TTTTCAGTAC TACACTGTGT 
TCCTGTAATA AATTCTTGGA AGAAAAACCA GATATATCGA TGCATATTCC CTCCACAATA
TCGGACTTTC AGGCTCTATT AGATCAAGGT GGTATATGGG TTAATGATCC AGGTTTGTTG
GAAATATTAG CAGGAGATTA TTATGTCAAT TCTAGTTCTT GGCAAAACTT AAATTCCGCT
GATGCAACTA ATCACATTTG GGCTTCGGAT GCTGTACCAA ACATACTCAG TTGGAATCTA
CCTTATCAAT TTCCGATCTA CTATTCAAAT ATAGTGTTGG ATCAACTAGC TTCCTCACAA
TTAAATGAAG ATATAAACTA TAAACAAATA CATGGTACAG CATTATTTTA TCGTGCAAAT
GCATTTTTCA CCCTTGCGCA AGTCTTTGCG AAACCTTATG ATGCCTCAAC GTTATCCGAT
CTGGGAATAG TTCTTCGTAC CACTTCAGAT GCCAATGCTA AATCTACCAG AGCTACAATT
GGTACAACGT ATGATAAAAT TCTAACTGAT TTAAAAAAAG CTGCGGAATT ACTCCCTGAG
AGTAGCATAA TTCAAACCAG ACCTACAAAA TCAGCTGCTT ACGCATCATT GGCAAGGGTG
TATTTGATGA TGCGAGATTA TAATAACGCA TTACAATATT CTAACTTAGT GTTACAAAAA
TCACAAACAT TATTAGATTT TAATGGACTT ACAGGGGGTG TCCCAATTGT AAATTTCAAT
AATGAAGTTA TATATTTCAG TCGGACACGA AGTGAGATAA TTTTGAGTCA AACTAATGCA
AAAATTAGCG AGACACTTTT AAACTTATAT ACTGATATTG ACCTGCGAAA AAGGATTTTC
TTCAGACCGA ATACTGGCAT TAATGCTGGA ACATTTGCTT TTAGAGGAAG TTATGGGGGA
TCGCAGTTTC CAGGTTCAGT GTTTACAGGA ACAACAACAG GGGAAATGCT TCTAATCAGA
GCTGAGTGTT TCGCAAGAAT AGACAATAAA GTTCTAGCTA TTAAAGATAT TAATACCCTT
TTGGCAAAAC GAATGGATAA AACCAAATGG AGTCCAATTG ATCCTAGTAC AGTCACTGAC
CCATTATCCC TAGTTTTAGC AGAAAGAAGG AAAGAATTGG TGTTCCGCGG ATTAAGATGG
ATGGATGTTA GGAGGCTTAA TATGGAAGGG GCTAATATCA CATTAAAAAG ACAGATAAAT
GGAATTGAAT ATACCCTGCC CCCTAATGAT CCGAGAGGAG TGGCACTGAT TCCTTTTGAT
GTGATCAATA GAGCAGGAAT ACCACAAAAT CCTCGATGA
 
Protein sequence
MKHKFEKLFF FSLIFSTTLC SCNKFLEEKP DISMHIPSTI SDFQALLDQG GIWVNDPGLL 
EILAGDYYVN SSSWQNLNSA DATNHIWASD AVPNILSWNL PYQFPIYYSN IVLDQLASSQ
LNEDINYKQI HGTALFYRAN AFFTLAQVFA KPYDASTLSD LGIVLRTTSD ANAKSTRATI
GTTYDKILTD LKKAAELLPE SSIIQTRPTK SAAYASLARV YLMMRDYNNA LQYSNLVLQK
SQTLLDFNGL TGGVPIVNFN NEVIYFSRTR SEIILSQTNA KISETLLNLY TDIDLRKRIF
FRPNTGINAG TFAFRGSYGG SQFPGSVFTG TTTGEMLLIR AECFARIDNK VLAIKDINTL
LAKRMDKTKW SPIDPSTVTD PLSLVLAERR KELVFRGLRW MDVRRLNMEG ANITLKRQIN
GIEYTLPPND PRGVALIPFD VINRAGIPQN PR