| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1991 |
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| Symbol | |
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| ID | 8253095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2297365 |
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| End bp | 2300928 |
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| Gene Length | 3564 bp |
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| Protein Length | 1187 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 644935641 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003092260 |
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| Protein GI | 255531888 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.694005 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000163482 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAATTA TTGCTGATAA CATAGGTATG CCTTTGCGTA TACCGCCTAA ACTATTATTA
ATAATGAAAC TAACCATTTT CATATTAATT ATTGCCCTGG TACAGGTTAG TGCCAGGGGA
TTTGGACAGA AGATAACGCT CAACACCAAT CATACGCCTA TTGAAAAAGT TTTACAATCT
ATAACCAACC AAAGTGGTTA CGAGATTTTA TACGATTTAA AAGATCTTAA GGATCAAAAG
GTAAGCTTAA AACTAAATAA TGTTTCTGTT GAAGAAGCCA TTAAAACAGT ACTTAAAGAC
TTGCCTTTTA CCTACCAGAT TATTAAAAAC AATATTGTAT TAAAAAAAGA GGAGCCTTCC
TTTCTGGAGC GCCTGGCTGA GCGCTGGGCT GATACTGATA TTCGTGGTAT GGTGCGTAAT
GAAAGGGGTG AAGCACTGGA AGGGATTACG ATAATGGTAA AGGGAGCCAA AACCGGAACA
AGGACCAATG CCAACGGTGA GTTTGTTTTA AAAGGCGTGA AAAAAGGTGA TGTACTGGTA
TTTACAGGTG TAGCCATTGA GCCTTTTGAA TATACGGTAA AGGATGATAA AAATATTGAA
CTGAATTTAA AAGCGAGGTT GGTGCAGTTG GAAGAGGTAG GGATTAATAC TGGTTACCAG
AAGATTAGCA AAGAAAGGTT TGTAGGTTCT TATAGCCAAT TGGATAGTGC AGCATTTCAT
AGACGTGCAG GAATGGGGAT TTTGGAGAGG TTGGATGGAA CATTGCCTGG CATATTGTTT
AATAAGAAGT TTACTTATGT AGCAGGTTAC AACAACACAA TTCAAATTAG AGGAATCAAT
ACAATCAACA GCAACCCTAA TCCTCTTATT GTTGTTGACA ATTTTCCTAT GGATGCACGC
TTTGACCTAA ATAGTATTAA CCCTAATGAT GTGGAAAACA TCACGATACT AAAAGATGCC
GCAGCAAGTT CAATTTGGGG TGCCCGTGCA GGTAATGGTG TAATCGTGAT TACTACAAAG
AAGGGAAAAT TAAACACGTC GGTTTCAGTA ACAGCCTCTT CAAATGTTAC AATTGAAAAT
CGACCAAATT TATACTACAC ACCAAAGATA AATACAAATG ACTTTATTGA ATTAGAAAAG
GAATTGTTTA GCAAAGGGTT ATATACAGAC AATTTAAATA ATACAAATAC GTGGCCTGTT
GTATCACCGG TAGTAGAATT GTTAAATGAA TATAGCAAAG GTGAGATAAA TCAAAATGAA
TTAGATCAGA AATTGGAAGT TTTGAAGGGA ATTGATATTA GAGAGGAATT AAACAAACAC
ATTTATCGAA CTGGTTTACG ACAACAACAT CATCTTACCT TAAATGGAGG CACCAACGCC
ATAGGATATA ACTTTTCGTA TGGATATAAT ACAACAAAGT CAAATATTCA AAACAGCAAA
GGAAATCAAC AGTATACATT AAATACCGCT GTTATTTTTA AACCATTGAA AAACTGGGAA
ATTCAAACTC AAGTTGCCTA TGGTAAAAGC AAAACTCAGC ATGTCCCACC AGATTTGTCT
TGGGCTAGAT ATCCCTATTT GCAACTTTCG GACATTCATG GAAATGCTTT AAGTGTACCT
TATCAAATAA GAACTAAATA CCTGGACACG ATAAACCACA GTGGATTATT GGATTGGCAA
TTTCGTCCAT TGGATGAAAT AAAATTAACT AATAATATTG CTACAAATCA GTTTACCAAC
ATAAATCTTG GAACTTCATA CAAAATCACA GATTGGCTAA CGGCATCGAT CAATTATCAA
TACTTGCATC AAATTAATTT GAGAAAAGCC CAAAATTCGA TAGAAAGTTA TTTTACTCGT
GACCTCGTTA ATAAATTCTT CAATCCGAAT CCAAATGTTG ACCCTAATTT AAAATATCCC
GTTCCAATTG GATCAATTTT AAGGGCTGCA TCTGACCAAT CCAGTACAAG TAATGGAAGA
GCTTCTCTAA GTTTCAATAA ATTTTTCGGA AGGCATAATA TCGCTGCTAT GGTTGCAACA
GAAGCTTCAG AAACCACGGG TAATGGCGAT AGCAATCTTA TCTATGGTTA CGATCCACGA
AATGGCAGTT ATAAACCTAA TGTTGATTTC TATTCGCAAT ATCCCTTAAC TTTTGCAACT
TCTCTGGGAA ATGTATTGCA GATACCAAAC GGACAAGGAG TAAATACTCA ATCCACCAAC
AGAGTGATAT CCTTGCTGGC CAATATCTCT TACAATTTTG CAGATAAGTA TTACTTGTAC
GGTAGTGCAC GGAGAGATGG ATCAAATATG TTTGGTGTGA AAACTAACAA TCGATGGAAA
CCTCTTTGGT CGATTGGTAG TAAATGGCAG TTATCTAAAG AAGAGTTTTT TAGTAGTTTA
TGGTTACAGA ATTTAGCAAT CCGAACGACC TATGGTTACG CTGGTAACCC AGGTAGCCAG
GCAGGTAGAA TGACAATGAT TTTTGCTTCC TTACCACAAT CTTTAACTGG ATTAACCTAT
GCTCAAGTCA ATTCTATTAA CAATCCAGAT TTAAGGTGGG AAAAGGTAAG TACCTTTAAT
TTAGGGGCTG ATTTTACAAT GTGGAAGGGC AGATTATATG GAAGTATGGA TATGTTCTGG
AAAAAATCTA CAGATCTGCT TGCTAACTAT CCAATGGATC CATCTGTCGG GGTAAATGCC
GCTATGATCA ACTCCGCAGA TATGAAAGGG AATGGTTTTG AAGTGCAATT GAATTCTAAG
AACGTCCAAG GCCCTTTTAG TTGGATTAGT AGCTTCGGTG TTAGTTATTC AAAAACGATT
GTTACTAAAG TGTACCAAGG GGGGTATAGG GCAAATGATT TTATCTCTTA TAGTTTAAAT
CCTTCAGAGG GAAAACTAGC CTTTTCTTTC TCGAGTTATA AATGGGCCGG GTTAGATCCG
TTAACTGGAG ATCCTCAAGG TTATCTAAAT GGTGCAATTA GTAAAGACTA TGATGCAATA
TTTAGTGATT CTATCCAAAA TCAGGTATAT CATGGGTCAA GTATTCCCTT ATATTCTACC
ACTATTGGAA ACACGATTAG TTATAAGAAT TTTAGTTTAT CCTTCGTCAT TACTGGCAGA
TTTAACTATT ATTTCCGTAA ACCTGCCTTG GAAATTAATA ATACTGATGT TGAATTAGGC
GCAACAAGGC TTATGGCTGA TTATTATCAA AGATGGCAAA AGCCTGGTGA TGAAAAAAAC
ACCAGTATTC CTTCTGTGAT ATATCCAGTA CCTCCAAATC TTTTCTCAAG AAGCTCCTTT
TATAGTGCAG CTCAGATAAA CGTTTTACGT GCAGACAATA TCAAACTTCA AGACATTAGG
TTTGGATATA CTTGGATTAG GAAAGGAAAT TCTCAATTTC CTTTCAAAAG CGGACAATTC
TTCTTTTACC CAAATAATCT AAACTTGATT ATTTGGAGGA AAAACAATTC TTCATTAGAT
CCCGACTTCA GCGGAGGATC GTCAGATCCG ACGTTAGCAC CTTCACCAAA GACTTGGACT
GTTGGTGCTT CAATTAATTT ATAA
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| Protein sequence | MQIIADNIGM PLRIPPKLLL IMKLTIFILI IALVQVSARG FGQKITLNTN HTPIEKVLQS
ITNQSGYEIL YDLKDLKDQK VSLKLNNVSV EEAIKTVLKD LPFTYQIIKN NIVLKKEEPS
FLERLAERWA DTDIRGMVRN ERGEALEGIT IMVKGAKTGT RTNANGEFVL KGVKKGDVLV
FTGVAIEPFE YTVKDDKNIE LNLKARLVQL EEVGINTGYQ KISKERFVGS YSQLDSAAFH
RRAGMGILER LDGTLPGILF NKKFTYVAGY NNTIQIRGIN TINSNPNPLI VVDNFPMDAR
FDLNSINPND VENITILKDA AASSIWGARA GNGVIVITTK KGKLNTSVSV TASSNVTIEN
RPNLYYTPKI NTNDFIELEK ELFSKGLYTD NLNNTNTWPV VSPVVELLNE YSKGEINQNE
LDQKLEVLKG IDIREELNKH IYRTGLRQQH HLTLNGGTNA IGYNFSYGYN TTKSNIQNSK
GNQQYTLNTA VIFKPLKNWE IQTQVAYGKS KTQHVPPDLS WARYPYLQLS DIHGNALSVP
YQIRTKYLDT INHSGLLDWQ FRPLDEIKLT NNIATNQFTN INLGTSYKIT DWLTASINYQ
YLHQINLRKA QNSIESYFTR DLVNKFFNPN PNVDPNLKYP VPIGSILRAA SDQSSTSNGR
ASLSFNKFFG RHNIAAMVAT EASETTGNGD SNLIYGYDPR NGSYKPNVDF YSQYPLTFAT
SLGNVLQIPN GQGVNTQSTN RVISLLANIS YNFADKYYLY GSARRDGSNM FGVKTNNRWK
PLWSIGSKWQ LSKEEFFSSL WLQNLAIRTT YGYAGNPGSQ AGRMTMIFAS LPQSLTGLTY
AQVNSINNPD LRWEKVSTFN LGADFTMWKG RLYGSMDMFW KKSTDLLANY PMDPSVGVNA
AMINSADMKG NGFEVQLNSK NVQGPFSWIS SFGVSYSKTI VTKVYQGGYR ANDFISYSLN
PSEGKLAFSF SSYKWAGLDP LTGDPQGYLN GAISKDYDAI FSDSIQNQVY HGSSIPLYST
TIGNTISYKN FSLSFVITGR FNYYFRKPAL EINNTDVELG ATRLMADYYQ RWQKPGDEKN
TSIPSVIYPV PPNLFSRSSF YSAAQINVLR ADNIKLQDIR FGYTWIRKGN SQFPFKSGQF
FFYPNNLNLI IWRKNNSSLD PDFSGGSSDP TLAPSPKTWT VGASINL
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