| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1966 |
|---|
| Symbol | |
|---|
| ID | 8253070 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 2269378 |
|---|
| End bp | 2269953 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 644935617 |
|---|
| Product | twin-arginine translocation pathway signal |
|---|
| Protein accession | YP_003092236 |
|---|
| Protein GI | 255531864 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0000304776 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAATAGAA GATCCTATTT AAAAGGTATT GTTTTTTTGG GAGCTGCTAG TGTTGTAACC
TATTTTGCCG GTATAAAAAA ATACTTTAAT AGGGCTCAGG ATATTGGGCA TATAAAAGAT
AAGGAACCAA TTTTGGCCGA ATTGGTAGAT CTTATTATTC CGGCAACTGA AAGCCCAGGT
GCAAAAGATG CATTAGTACA TCTCTATATC ATCAAAATCT TAACAAATTG TCATACTAAA
GCTTTACAAA ATGAATTTCT GGCAGGAATC GCAGATTTGG AAAAAAAAGC CATAAGTAAT
TATAATAAAG ATTTTTTAAA ATGTACACTA CCTGAGAAAA TGGCGGTTTT AGATCTGTTT
GCAAGAAAAT CAGGTTACAA CTCAGCAATT CTGAATAAGA TCATTAAAAA AATATTCGGT
GAATCATTTT TTCCTATGTT AAAAAGATTA ACTGTTGAAG GATATTGTCT TTCAAAACCG
GGGGCAACAC AAGGGTTAGA ATACGATTAT ATTCCTGGTG CATTTTATGC ATGTGTGCCC
TTAAAAAAAG GACAAAAATC CTGGGCAACA AAATAG
|
|---|
| Protein sequence | MNRRSYLKGI VFLGAASVVT YFAGIKKYFN RAQDIGHIKD KEPILAELVD LIIPATESPG
AKDALVHLYI IKILTNCHTK ALQNEFLAGI ADLEKKAISN YNKDFLKCTL PEKMAVLDLF
ARKSGYNSAI LNKIIKKIFG ESFFPMLKRL TVEGYCLSKP GATQGLEYDY IPGAFYACVP
LKKGQKSWAT K
|
|---|
| |