| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1945 |
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| Symbol | |
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| ID | 8253049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2245756 |
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| End bp | 2247141 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644935596 |
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| Product | beta-lactamase domain protein |
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| Protein accession | YP_003092215 |
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| Protein GI | 255531843 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.000813618 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAATTGA CAATATTAGG CGCAGCACAG CAGGTAACCG GAAGTATGCA CCTGTTACAA
CTGGATAACT ATAATATCAT TGTTGACTGC GGACTTGATT ATGAGAAAGA GACCTATCAA
AACGAAAACC TTTATTTCCC CTTCGATCCT GCAGCTATTG ACCTCGTTAT ACTCACACAT
GCACATATAG ACCATTCAGG GAACCTGCCC ACCTTGGTGC GCATGGGTTT CAACGGACAA
ATCCTTTGTA CCCCTCCTAC CGCCGATCTT ACAGAACTGC TTTTACTCGA TTCGGTAAAT
ATTTTTCTAA GCAAACAAAA TAAACGGTCC CGCAGTAAGA GAACCAAATC CGGTCCCGAA
CCGCTTTACC TGCAAAAACA TGTAAAGGAT ACTGTTGAAC GCTTTGTAAC CATCAACTTT
AATAAAGAAT TCCAGATTAA CAATCAGGTG TCACTTACCT TTATCCCCAT AGGACACTTA
CTTGGCGCCG CTGCAGTAAT ATTAACGGTC CATGAAAATG GAACCATAAA AAAAATTGCC
TTTACCGGCG ATATCGGACG AAAAAACTAT CCGTTGCTAA CCAACCCACA ACCTTTGCCC
CCTGTAGATT ATCTGGTCTG TGAATCTACT TATGGTGGAC GTCTGCATAG TACCGACAGC
ACGCTGGAAC AAAAGCTCAT AGAAACAATT ACGGAGTCCT GTATCAAATA TCCCGGACGG
TTGATCATCC CGGCATTCAG TATTGGCAGA ACCCAGGCAC TGGCATATGC CCTCAACAAA
ATATTCAGTA ATGGATTGCT CCCTTCTGTA AAAATATTTA TTGATAGCCC TCTTGCCGGT
TCAGCAACAG AAATTTATAG CAAGTACCAT CACCTGCTTA ATGATGAGGC AAGGGCATTT
TACGAAAAAA ACAACCACAG CTTTGAGTTT AAAGAACTTT CATATGTAAA CGATAAACGC
GAAAGCTTGT CTGTTTCTAA TTACCATGAA CCCTGTATCA TCATCTCTTC GGCCGGTATG
CTCGAAGGTG GCCGGATTCA GGATCACCTT TACTATAACA TACAAAATTA TTATTGTACC
ATATTGTTTA TAGGATATTG CGCTAAGGGT ACATTAGGGA ACAGGCTTTT AAGGGGCGAC
CCCATTGTCC GGTTACGAAA CCGTGATCTC ATGGTATATG CAACTATAAA ACAAACCGAT
CTGTTAAGTG GCCATGGAGA TCACAATGAT CTTTTAAATA CAGTCAGACA TCAGTCTTCC
TTAACATTAA AACAGGTATT TCTGGTACAT GGGGAAACGA AAAGTATCGG GGCACTGGCC
AATGCCCTGC AATCAGAAGG ATATGCCGTT TCCATCCCTC AAAAAGGGCA GAGCTTTGAA
TTGTAA
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| Protein sequence | MKLTILGAAQ QVTGSMHLLQ LDNYNIIVDC GLDYEKETYQ NENLYFPFDP AAIDLVILTH
AHIDHSGNLP TLVRMGFNGQ ILCTPPTADL TELLLLDSVN IFLSKQNKRS RSKRTKSGPE
PLYLQKHVKD TVERFVTINF NKEFQINNQV SLTFIPIGHL LGAAAVILTV HENGTIKKIA
FTGDIGRKNY PLLTNPQPLP PVDYLVCEST YGGRLHSTDS TLEQKLIETI TESCIKYPGR
LIIPAFSIGR TQALAYALNK IFSNGLLPSV KIFIDSPLAG SATEIYSKYH HLLNDEARAF
YEKNNHSFEF KELSYVNDKR ESLSVSNYHE PCIIISSAGM LEGGRIQDHL YYNIQNYYCT
ILFIGYCAKG TLGNRLLRGD PIVRLRNRDL MVYATIKQTD LLSGHGDHND LLNTVRHQSS
LTLKQVFLVH GETKSIGALA NALQSEGYAV SIPQKGQSFE L
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