| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1936 |
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| Symbol | |
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| ID | 8253040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2237626 |
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| End bp | 2238192 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644935587 |
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| Product | helix-turn-helix- domain containing protein AraC type |
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| Protein accession | YP_003092206 |
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| Protein GI | 255531834 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0105063 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTGTTAT ATGTTAAAAA TATGGTTTGC GACCGCTGTA TCATGATTGT GAGGCAGCAG
CTGGAAAATT TTGGGTTTAA AGTGAAAGAG ATTTCTTTAG GAAAAATAGC TATTGAACCT
GAGGCCAATG AGGGACAACT GCAGGACATT GCTGCTGCTT TAGGAACGTT GGGATTTGAG
TTGATGGATA AGGAAAAAGA CCAGCTGGTT GAACAGATTA AAACACAGGT GATTGATCTG
ATCCATTATT CGGAGCTGAA TGAGCTGCAA CAGAGCCTGA GCCAGGAAAT AGCAGATAAA
TTAAATAAGG ACTATGCTTA CCTGAGCAGG CAGTTTTCTG ATGCTGAAGG CCTGACCATT
GAAAAGTACA TTATCCAGCA AAAAATTGAA AAGGTAAAGG AATTACTTGA ATATGGCGAG
CTGAATTTAA ACGAGATTGC TTATAAGATG GGATACAGCA GCAGTGCACA TTTATCGACC
CAGTTTAAGG CGATTACAGG TCTTACGCCG AGTAAGTATA AAACGGCTAC CTTAAACGAC
AGAAAATCAT TGGATAAGGT TGGATAG
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| Protein sequence | MLLYVKNMVC DRCIMIVRQQ LENFGFKVKE ISLGKIAIEP EANEGQLQDI AAALGTLGFE
LMDKEKDQLV EQIKTQVIDL IHYSELNELQ QSLSQEIADK LNKDYAYLSR QFSDAEGLTI
EKYIIQQKIE KVKELLEYGE LNLNEIAYKM GYSSSAHLST QFKAITGLTP SKYKTATLND
RKSLDKVG
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