| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1925 |
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| Symbol | |
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| ID | 8253029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2227137 |
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| End bp | 2228123 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644935576 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_003092195 |
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| Protein GI | 255531823 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0178624 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAT TTATAAAAAA CTATTGGGCA CTGCTTATCC CCATACTTGT TGTTATAGTG
GCCTTGTTTT TCTTTCTTGC CGGAAATAAA GATGAAACGC ACCTGATCGG CATGGTGGAT
GCTTCCAGTG TAGATGTGGC TGCGGAGTTT CCAGGGAGAC TGGACTCCCT GCTGGTAGAA
CAGGGAGATA CAGTTAAGGC TGGACAGCTG CTGGCTATTT TGCGTTCCAA TGAAATTGAT
GCCATTAAGT CGCAGGCCTT ATCGGCTATA GATGCTGCCA AAGGACAACA GGAACTATTG
GTGCAGGGCG CCAGGCCTGA GCTGATTGAG GCTACATCAA AACTTTATCA GATTAGTGAG
GAGCAGTATA AGCTGTTCAA TACCACCTAC CAGCGCATGG AACGCTTGTA TAATGCAGAC
GTGATTTCCG GGCAGGAAAA AGATGTTTTT TACTTCCGGT ATCAGGCTGC AAAAAAAGAA
ATGGAAACAG CACAGCTCAA TTTGCAGATG CTGAAAAATG GTACACGCCC CGAAATCATC
AAAACGGCCA ATGCCATCGT AAAACAGGCA GAGCAGGCTT ATGAGCTGAC CAAAGCGCTT
GGCGACAATA CCAAAGTTTA TGCCCCGGCA GCTGGGGTGA TCTCGAGCCT GGTTACCCAT
CAGGGGGAAA TTGTTTCTAT AGGCTATCCG ATGATGACCA TTGAAAAGAA AAATTCATCA
CTTATAAGGT TCAATATCCG GCAGGACAGG GCGAAAGACC TAAAAGTAGG TGCTATGGCA
AAAGTGACCA TTCCTGGTTG TGAGCCTGAA ACTTTTGAAG TAAAAGTATC TGCCATTTCG
CCTACGCTCG AATTTGCCAA CTGGGTGCCT TCAAAAGATA AAGGGCAATT TGAGCTGCGT
ACGTTTACTG TAGAGTTTAA GCCTGAGAAC CTGGCCGCAG TTAAAGGTTT ACGTTCGGGG
ATGACGGCTT CATTAATCCT GCCCTGA
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| Protein sequence | MKKFIKNYWA LLIPILVVIV ALFFFLAGNK DETHLIGMVD ASSVDVAAEF PGRLDSLLVE
QGDTVKAGQL LAILRSNEID AIKSQALSAI DAAKGQQELL VQGARPELIE ATSKLYQISE
EQYKLFNTTY QRMERLYNAD VISGQEKDVF YFRYQAAKKE METAQLNLQM LKNGTRPEII
KTANAIVKQA EQAYELTKAL GDNTKVYAPA AGVISSLVTH QGEIVSIGYP MMTIEKKNSS
LIRFNIRQDR AKDLKVGAMA KVTIPGCEPE TFEVKVSAIS PTLEFANWVP SKDKGQFELR
TFTVEFKPEN LAAVKGLRSG MTASLILP
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