| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1924 |
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| Symbol | |
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| ID | 8253028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2225617 |
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| End bp | 2227101 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644935575 |
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| Product | Outer membrane protein |
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| Protein accession | YP_003092194 |
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| Protein GI | 255531822 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0996265 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAAAT ATCTACCTGC TCATCTGCTC AAAAAGGAAC GGTATAAGTT ATTTGTATAC
CTGTTGGCTT ACTTTTTTAT GGTTTTTGAG GTGGAGGCTT ATGGCCAGAC TACAAGCCTG
AATGCCTGTT TTGATTTAGC CAGAAAAAAT AACCTTAGTG TAAAGCAGGC CAGGTCTGCC
TTATTATCCG GCCAGTACAA CCTGCAGGCC GAAAAAAAGA GTTATTTACC TAAGGTAGAT
TTATTGTCAA GCTATACTTA TCTGAGCAGC CCTCTGACCA TAAACCTGCA AACCGCTAAG
GATGGAATTG TAAATGGCTC ATCCCAGCAA AGTGTGAATG CTGCAAATGA GGTGTTTAAA
GAAATTACCG GTAATAATCT ATCGCAGGCC GTACAGGACA GGATTTACAA TACTTCGAAA
AATATCATTG GTAGCATTTA CCCTGATTAT AATCCGGAAC TTAGTAAACA GTCGTATTTT
GTTGCTGGTC TTGGATTAAG GCAACCCATA TTTCTGGGAA ATAAGCTGGA TGCCGCGCAA
AATCTGGCAC AATCGCTGGT CAACACAGCG AGTATCAATG TGAATGTGGT GAATAAGGAG
GTTGATTTTC TCATTGCCCT GCAATACCTG CGGATTTTGT ACCTAAACAC CATTTTAAAT
AAGCAGGAGT TTATTGTGAT AGCATTAAGC AAAAATAAGA ACTATGCAGA CGAGCTGGTA
AAGAACCAAA TTCTGGCCCC TTATCAAAAA AGCTGGACCA ATGTAGTATT GATGCAGGCC
CGAAGCCAGC TTACGAGTCT TAAGCTGGAT AAGCAGAATG CCCATCTGGA ACTGAATAAA
CTTATGGGCC TGCCACTGGA TACCAATGTG GTTATTTCGG ATACCTTAAC ATACACGGGG
ATTGCAGCAG TGCCGGCCCA GAGTGATTAC TGGACAGAAA ATCCTGTATA TCAATTGGCG
GCCAGTAAAA TTGCTTATGC CAAAACTTCT GAAAAGATCA GCAAATCATT TGCCCTGCCC
AATATTTTTG CGATAGGCAA TTACAATTTG TACCAGCGCG ACCTACCTGT AACTATACCC
GACTGGTTTG TTGGGGTTGA ACTGCAATGG TCGTTGTTTA ACGGGCAAAC CCGGAAGCGT
ACCCTTGCTG CCAGGCAACT GGTTGAGGAG GCTAAGCTTG CCGAAGAAAA TGCAGGGCTG
CTGCTGCAGG TGCAATCAAA AATTGCAAAA AATCAAATGA CCTCGCTGGA AAATGAAGTT
GGGGTACTCG ACAATGCCCG GAAAGAGGCG CAGACCACAT CCCGGTTAAT TACCAAACGT
ATGGAAAACC AGCTTTCTTC GCCCAAAGAT GTAAATGATG CGGTGCTGAT AGAAGCAGAA
ATGGAAAAAG CATATTATAC GGCTGTGCTG GGTTATTACC TGGCGCTTGC CGGCTATTTT
AACAGTTTAG GGAACCCCCA GCAAATCAGT CAGTTTATCA GGTAA
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| Protein sequence | MIKYLPAHLL KKERYKLFVY LLAYFFMVFE VEAYGQTTSL NACFDLARKN NLSVKQARSA
LLSGQYNLQA EKKSYLPKVD LLSSYTYLSS PLTINLQTAK DGIVNGSSQQ SVNAANEVFK
EITGNNLSQA VQDRIYNTSK NIIGSIYPDY NPELSKQSYF VAGLGLRQPI FLGNKLDAAQ
NLAQSLVNTA SINVNVVNKE VDFLIALQYL RILYLNTILN KQEFIVIALS KNKNYADELV
KNQILAPYQK SWTNVVLMQA RSQLTSLKLD KQNAHLELNK LMGLPLDTNV VISDTLTYTG
IAAVPAQSDY WTENPVYQLA ASKIAYAKTS EKISKSFALP NIFAIGNYNL YQRDLPVTIP
DWFVGVELQW SLFNGQTRKR TLAARQLVEE AKLAEENAGL LLQVQSKIAK NQMTSLENEV
GVLDNARKEA QTTSRLITKR MENQLSSPKD VNDAVLIEAE MEKAYYTAVL GYYLALAGYF
NSLGNPQQIS QFIR
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