Gene Phep_1919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1919 
Symbol 
ID8253023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2220480 
End bp2221604 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content44% 
IMG OID644935570 
Producthypothetical protein 
Protein accessionYP_003092189 
Protein GI255531817 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.268267 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.285057 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATA TACAGCTAAT TATGTGCCTG TGCAGCCTGG TGTTTGTGGC CTGCAGAAAG 
GACCTGCAGC CCTCTAAAGA AGAGACACAA ATGCTGACAC CCGATCCGGG CAGTGTAATG
AAAGGGTTTT ATGTGGTGAA CGAGGGGAAC ATGAACATGA ACAAGGCATC CCTCGATTAT
CTTAACCTGA GAGAAGGGAT TTACCGCAAA AATATCTATG GTACGGCCAA TCCTGAGGTG
ATTAAGGGGC TTGGTGATGT GGCCAATGAT ATCGGGGTAT ATGGGTCGAA GTTATACGTA
GTGGTCAATG TTTCCAATAA AGTAGAAGTA CTGGATGTGA AAACAGGTAA AAAGATCAGT
CAGATCAATA TGATCAATTG CCGTTACATC ACTTTTCATA ATGGTAAAGC TTATGTGAGC
GCCTATTTGG GAAGGGTTGG TGACCCAAGT GCACCCAGGG GTATTGTTGC CAGGATAGAC
ACACTGAGTT TGCAGGAAGA GAAAAGGGTG GAAGTGGGCC GGCAACCGGA AGAAATGGCC
ATTGTTGGAG AAAAATTGTA TGTGGCCAAT TCTGGGGGGT ATAGTCCGCC CAACTATGAA
CGCACAGTGT CTGTATTGGA CCTGAATACT TTTCAGGTGC TAAAAAATAT AGATGTGGCG
ATCAATCTGC ACCGTATTAA AGCTGATCAG TACGGCGACC TCTATGTGAC CTCGAGGGGG
GATTATTACG ACATCCCCTC TAAGCTTTTT GTGATAGATA CGCAGACAGA TGCCATAAAA
AAATCGTTTG ACATTGGCAT CAGCAACCTG GCGATTGATG GCGACCTGGC TTATTTTTAT
GGTACTGTAT TCAGTTACCT GACTGGCAAT AACACCATTA CCTACGGAGT ACTGAATGTA
AAGGATGAGG TGCTGACGGA TAAAAAATTT ATTACAGACG GCACGGATAA AAAGATCATC
ATCCCTTATG GGATTGCAGT GAACCCTTTT ACAAAAGATG TATATGTTAC CGACGCCAAA
GATTATGTTT CGCCGGGTAT GCTGTATGGT TTCAATGCGG CCGGGAAAAT GAAATGGTCT
GTTAAAACAG GGGATATCCC CGCACACTTT GCATTTATTT ATTAA
 
Protein sequence
MKNIQLIMCL CSLVFVACRK DLQPSKEETQ MLTPDPGSVM KGFYVVNEGN MNMNKASLDY 
LNLREGIYRK NIYGTANPEV IKGLGDVAND IGVYGSKLYV VVNVSNKVEV LDVKTGKKIS
QINMINCRYI TFHNGKAYVS AYLGRVGDPS APRGIVARID TLSLQEEKRV EVGRQPEEMA
IVGEKLYVAN SGGYSPPNYE RTVSVLDLNT FQVLKNIDVA INLHRIKADQ YGDLYVTSRG
DYYDIPSKLF VIDTQTDAIK KSFDIGISNL AIDGDLAYFY GTVFSYLTGN NTITYGVLNV
KDEVLTDKKF ITDGTDKKII IPYGIAVNPF TKDVYVTDAK DYVSPGMLYG FNAAGKMKWS
VKTGDIPAHF AFIY