| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1918 |
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| Symbol | |
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| ID | 8253022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2218415 |
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| End bp | 2220478 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644935569 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003092188 |
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| Protein GI | 255531816 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.138807 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.178557 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAGAA AATCAAGTGC CATACGTGGC ATGAATTGTC GTTTCTCTGT TTTTTTTAAA
GCTATACTTT GGCTGGGGAT TTTTATGCCC CTTACTTTGT TTGCCCAGGA GGATGTGGTT
AAGGCTAAAA AAGCCGATTC TATTGATAAG GTAAACCAAC TTAAAGAAGT ACAGATCAGA
ACCATAAAGA TTGGCAGGAG GCAAACTTCA TCTACACCTT TACAAATCCT TTCGGGCGAA
GAGTTGCAAC GCCTGAACAG TTTATCGGTA GCCGATGCCG TCAGGTATTT TTCGGGGGTA
CAGTTAAAAG ATTATGGTGG CATTGGTGGC TTAAAAACCA TCAATGTGCG CAGCATGGGT
ACCAACCATA CTGCTGTTTT TTACGATGGG GTACAATTGG GCAATGCACA GAACGGGCAG
GTCGACCTGG GAAAATTTTC ATTAGACAAC ATAGCCGAAA TTGAGCTGTA TAACGGGCAA
AAGAGTACCA TATTTCAATC GGCAAAAGGC TTTGCTGCCG GAAGTTCATT GTATATAAAC
TCAACGCAGC CTGATTTTGA AGATGGGCGC AGTGATAAAT GGAAAGCCAC ATTAAAAGGT
GGTTCATTTG GCCTGATAGA TCCTTCTGTG CTTTGGCAGC ATAAAATCAG CGAAAGCATA
TACAGTTCCT TAAGTGCCGA ATGGAAAAAA GCAAGTGGCC GTTACAAGTT CAGGGTAAGG
AATTACGGTT ATGATACCAC AGCAGTAAGG GAAGATGGTG GGATTGAGAC CATGCGGCTT
GAGCTTGGAC TGAACGGGGT ATTGCCGGAT AGCAGTCTGT GGACGGTTAA GTTGTATGGA
TACAATGACA AACAGGGCTT GCCAGGGGCC ATAGTAAATA ATGTATGGCG TTTTCCGCAG
AGAATGTGGA ACAGAAACTT TTTTGCGCAG TCGACCTTCA AAAAAGACCT GCACAAATAT
CATCTTTTGG CTGCTGTTAA ATATGCTAAC GATTATACCA AATATCTTGA TCCGAACTAT
GTAAAAGATA CTGGCTTTCT GACAAATATC TATAAACAGC AGGAGCTGTA TTTTTCGCTG
GCCAACCGTT ACCAGCTCAG TTCATTCTGG GATATCGTTT TGTCGGGCGA TTACCAATGG
AACACTTTGG ACGCCAATAT GGATCGTTTT CCATATCCTA CCAGGTATAC GGGCCTGCTG
GCCCTGGCTA CCGAAATTCA TTTGGACAGG TTAAATATTC AGGCCAATTT GCTGGGCACA
CTGGTTAATG ATGAGGTAGA ACGCTATTTT TCTGCGGGTA ATAAAAGGGA ACTTAAGCCC
TCTGTAATGG TTTCCTGGCA GCCTTTCAGC TTAAAGGAAT TTCGTTTACG CGGATTTTAT
AAGGATATAT TCAGGATGCC TACTTTTAAT GACCTGTATT ATACCCTATT GGGGAACACT
TTCCTGAAAC CGGAATATGC AAAACAATAC GATCTTGGAT TTACCTATAT CAGGTTGATT
GACAATCATT TGCTGAACCA GATCAGTATA CAGTCGGATG TATATTACAA CAAGATCAGA
AATAAGATTG TTGCAGTTCC AGGGGCCAAT TTGTTTACCT GGAGCATGCA GAACCTGGGG
TTGGTAGAGA TCAGGGGCCT GGATGTGAAT ATACAGACCG GCTGGCGTAT TGCCGATCAG
CTGATGGTCA ACACCGGTAT TACCTATACC TATCAGAAGG CTTTGAACAT GACAGATGTG
AACCTGAACT ATAAGAACCA GATCCCATAT ATTCCTGTAC ATAGTGGTTC CTTTACTGCT
GGTGCCGACT GGAGAAACCT GGGTCTGAAC TACAGTTATA TCTATACGGG CGAGCGTTAT
GATCAAAGTG CCAATATTAT TGAAAATTAT GTTCAGCCCT GGTACACCCA TGATATTGCC
TTTCATTACC ATAAAGATCT AAAACATGCC CGTGTTAAAG TATCGGTCGA GGTAAACAAC
CTTTTGAATC AAGATTATGA AGTGGTTACC AATTTTCCAA TGCCGGGCCG GTCGTATCGT
TTCACCTTAT CTTATGCTTA CTGA
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| Protein sequence | MIRKSSAIRG MNCRFSVFFK AILWLGIFMP LTLFAQEDVV KAKKADSIDK VNQLKEVQIR
TIKIGRRQTS STPLQILSGE ELQRLNSLSV ADAVRYFSGV QLKDYGGIGG LKTINVRSMG
TNHTAVFYDG VQLGNAQNGQ VDLGKFSLDN IAEIELYNGQ KSTIFQSAKG FAAGSSLYIN
STQPDFEDGR SDKWKATLKG GSFGLIDPSV LWQHKISESI YSSLSAEWKK ASGRYKFRVR
NYGYDTTAVR EDGGIETMRL ELGLNGVLPD SSLWTVKLYG YNDKQGLPGA IVNNVWRFPQ
RMWNRNFFAQ STFKKDLHKY HLLAAVKYAN DYTKYLDPNY VKDTGFLTNI YKQQELYFSL
ANRYQLSSFW DIVLSGDYQW NTLDANMDRF PYPTRYTGLL ALATEIHLDR LNIQANLLGT
LVNDEVERYF SAGNKRELKP SVMVSWQPFS LKEFRLRGFY KDIFRMPTFN DLYYTLLGNT
FLKPEYAKQY DLGFTYIRLI DNHLLNQISI QSDVYYNKIR NKIVAVPGAN LFTWSMQNLG
LVEIRGLDVN IQTGWRIADQ LMVNTGITYT YQKALNMTDV NLNYKNQIPY IPVHSGSFTA
GADWRNLGLN YSYIYTGERY DQSANIIENY VQPWYTHDIA FHYHKDLKHA RVKVSVEVNN
LLNQDYEVVT NFPMPGRSYR FTLSYAY
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