| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1902 |
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| Symbol | |
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| ID | 8253006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2198969 |
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| End bp | 2200861 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644935553 |
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| Product | ATP-dependent DNA helicase, RecQ family |
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| Protein accession | YP_003092172 |
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| Protein GI | 255531800 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.204638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAGA CGGAGATATT AAAGCGGTAC TGGGGATATG ATGGTTTCAG GCCATTGCAG
GATGAAATTA TCAGATCTGT TTTAAACGGG CAGGATACTT TGGCCTTATT GCCTACTGGT
GGTGGGAAAT CGATCTGTTT CCAGGTGCCT GCTATGCTGA AAGAAGGGAT TTGTATCGTG
ATATCGCCTT TGGTGGCCCT GATGAAAGAC CAGGTAGAGG CCCTTAAAGC AAAAGGCATT
GATGCAGTGG CCATTTATGC AGGGATGGGA AAAAGGGAGA TCGATATTTT GCTTGACAAC
TGCATTTACG GAAAGATCAA ATTTTTGTAC CTCTCGCCGG AACGTTTATT ATCGGAACTG
GTGCGCGTGC GGATCTCTTA CATGAACGTA AACCTGATTG CCGTAGATGA GGCCCATTGT
ATTTCGCAAT GGGGCTATGA TTTCAGGCCA CCCTATCTGA AAGTCAGTGA GATCAGGGAA
ATCCATCCCG ATGTACCTGT TTTAGCCCTG ACGGCTACTG CTACGAAGTT TGTGAGAACA
GACATTATGG AAAAACTGCA GTTTAAAAAA CCGCATGTTT TTGTACAGAG CTTTGCCCGT
AAAAACCTGA GCTATGTAGT GCAGGATGAT GAAGATAAGT ACAAAAAGCT GATCAGTATT
GTAAATAAAG TAAGAGGTAG CGGACTGGTA TATGTGCGCA ACCGGAGGGA GACTGCCGAA
GTAGCCTCTT TTTTGAGCAG GAACGGGGTG GCTGCAGATT TTTACCATGC TGGGGTAGAG
AAGGAAGAAC GTTTCAGGAA ACAGGAGGAC TGGAAGCGGA ACCGCATCCG GGTGATGGTG
GCGACGAATG CTTTTGGAAT GGGAATAGAT AAGCCTGATG TACGTTTTGT GGTACATTTA
GACCTGCCGG AAAGTTTGGA AGCCTATTAC CAGGAAGCGG GCCGGGCAGG GAGGGATGGT
AAAAAAGCTT ATACCATATT GCTGGCCAAC AAATCGGACG AATTGTCCTT AAAAGCGAAA
TATACAGCTA GTTTTCCTTC GGTTGAGGAG ATCAGAAAAG TGTACCATTA CCTGGGTAAT
TATTTTCAGC TGGCTTATGG GGCAGGGGAA GGGCTGAGTT TTGGTTTTGA CCTGGCCGAT
TTTTGTAAGC GCTTTAATGT AGGGGTAATT AAAACGATGG GCGCCTTAAA ATTTTTGGAG
CACGATGGAT ACATTACCTT GTCGGAAAAC ATATTTTTAC CTTCCAGGGT ATTGTTTGTG
GTGGGCAATG AAGATGTTTA CCGTTTCCAG ATAGAAAATG CAGGTTATGA CCCGCTGATA
AAAGCCATAC TGAGGTTGTA CGGTGGTTCA TTTGAACAAT ATGTAAAGAT CAGCGAGGCG
GATATTGCAG CAAAACTGCG CATTTCCTAT AACGATGTGC TGCGGCAGCT GAACAATTTA
CAGGAACAGG GCTTATTGTC TTATATCCCG CAAACAGATC AACCACAATT ACAGTATATC
CGGCCAAGGC TGGATTTTAG CCATATGGAT ATCGACCTGA AATACATTGC ACAGCGCAAA
CAGATCCAGG CCGAGCAGAT TACTGCGGTG CTGGCTTATG CCGGTAAAAA GATTTGCAGA
AGTATACAGT TGCTCACTTA CTTTGATGAA CCGGAGGCAG ATAAATGTGG TGTTTGTGAT
GTGTGCCTGG CCGAAAAAAA AGCCGATGAT GCAGCGATGC TGAAGGATAA GCTGGATTTT
GAGATTGTTA CCCTGTTGCA AAGTGAGAGT TACCTGCTGG ATGTGCTGGT AAATGCGGTA
AGTACAGGAA CAGAAAACGA ACGCCTTGGA CGTATCCGTG AATTGCTGGA TGCCGGAAAG
ATTAAAACAG ATGGTAAAAA TTATTACCTT TAA
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| Protein sequence | MNETEILKRY WGYDGFRPLQ DEIIRSVLNG QDTLALLPTG GGKSICFQVP AMLKEGICIV
ISPLVALMKD QVEALKAKGI DAVAIYAGMG KREIDILLDN CIYGKIKFLY LSPERLLSEL
VRVRISYMNV NLIAVDEAHC ISQWGYDFRP PYLKVSEIRE IHPDVPVLAL TATATKFVRT
DIMEKLQFKK PHVFVQSFAR KNLSYVVQDD EDKYKKLISI VNKVRGSGLV YVRNRRETAE
VASFLSRNGV AADFYHAGVE KEERFRKQED WKRNRIRVMV ATNAFGMGID KPDVRFVVHL
DLPESLEAYY QEAGRAGRDG KKAYTILLAN KSDELSLKAK YTASFPSVEE IRKVYHYLGN
YFQLAYGAGE GLSFGFDLAD FCKRFNVGVI KTMGALKFLE HDGYITLSEN IFLPSRVLFV
VGNEDVYRFQ IENAGYDPLI KAILRLYGGS FEQYVKISEA DIAAKLRISY NDVLRQLNNL
QEQGLLSYIP QTDQPQLQYI RPRLDFSHMD IDLKYIAQRK QIQAEQITAV LAYAGKKICR
SIQLLTYFDE PEADKCGVCD VCLAEKKADD AAMLKDKLDF EIVTLLQSES YLLDVLVNAV
STGTENERLG RIRELLDAGK IKTDGKNYYL
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