| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1888 |
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| Symbol | |
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| ID | 8252992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2182184 |
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| End bp | 2183170 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644935539 |
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| Product | Exonuclease RNase T and DNA polymerase III |
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| Protein accession | YP_003092158 |
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| Protein GI | 255531786 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTGA ATTTAAAACG CCCACTCGCT TTTTTTGATC TGGAAACCAC TGGTGTTAAT
GTAGGTGCTG ATCGTATTGT CGAAATTGCA ATATTGAAAG CCATGCCAGA TGGATCTGAA
CTGATCAAGA CCATGCGCAT CAATCCTGAA ATGCCGATCC CATTGTATGC TTCACTGATC
CATGGAATTT ACGACGAACA CATTGCCAAT GAGCCTATAT TTAAAGAGGT AGCTACTGAA
CTTGCTGATT TTATTGGTGA TGCAGACCTG GCAGGCTACA ACTCCAACAG GTTTGATATC
CCGGTATTGC TGGAAGAGTT TTTAAGGGCA GGGGTTGACT TTGATATGTC CGACAGGAAA
TTTGTTGATG TGCAGAACAT ATTTCATCAG ATGGAGCAGC GTACCCTCAG GGCTGCTTAT
AAATTCTATT GCAACAAAGA CATCATCAAT GCACATTCCG CAGAAGCAGA TATTACGGCA
ACCTATCAGG TATTGCTGGC ACAGATAGAA CGTTATAAAG ACATTGATTT TGAGGATAAG
CAGGGAAATA TATCCAGGCC TGTACAAAAC GATGTAGAGG CACTTCATGC TTTTACCAAT
ATGAACAAAC CGGTTGACTT TGCCGGAAGG ATGGTCTATA ATGAAAATGA TGAAGAGACC
TTCAATTTTG GTAAACATAA GGGCAAAACT GTTGAGCAGG TTTTTGACAT TGAGCCCAGT
TATTATGCCT GGATGAAGCA GGGTGATTTT CCCTTATATA CCAAGAAAAA ACTCGAGGAG
ATCTGGACCC GCTGGAACAA AAAGAAGGAA CAGCTTAAAC TGGAAAGGCA GCAGCAGGCT
GAAGCAAACA GGCCAAAAAA CCCTCAACCG GTTAAAGTGC AGCAAAACCC TGCTAAGCCA
CAACACCAGC AGCCTAAAAA AGAAAAACCA GCTGCTGAGC TGACCAACGA TATGCTGGAG
CAGCTGAAGA TGAAATTTGG AAAATAA
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| Protein sequence | MKLNLKRPLA FFDLETTGVN VGADRIVEIA ILKAMPDGSE LIKTMRINPE MPIPLYASLI
HGIYDEHIAN EPIFKEVATE LADFIGDADL AGYNSNRFDI PVLLEEFLRA GVDFDMSDRK
FVDVQNIFHQ MEQRTLRAAY KFYCNKDIIN AHSAEADITA TYQVLLAQIE RYKDIDFEDK
QGNISRPVQN DVEALHAFTN MNKPVDFAGR MVYNENDEET FNFGKHKGKT VEQVFDIEPS
YYAWMKQGDF PLYTKKKLEE IWTRWNKKKE QLKLERQQQA EANRPKNPQP VKVQQNPAKP
QHQQPKKEKP AAELTNDMLE QLKMKFGK
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