Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1884 |
Symbol | |
ID | 8252988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 2177491 |
End bp | 2178015 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644935535 |
Product | NLP/P60 protein |
Protein accession | YP_003092154 |
Protein GI | 255531782 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.715704 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATCA GTAGTTTATT ATCCGGAAAA AACAGATACA GCATGCTGCT GCTGCTATTG GTTGCATTAT TTTTTTCTGC CTGTAGTTCA AGACGGAATA CGGTGAAGCC TGGCAGTACG GCTGCGGCCA AAGCTGCAGA CGCCATGTCG CATTTAAAGA ACAGGAGCCT GTATAAGTTT ATAACCGATT GGACAGGTGT TCAGTATAGG TTGGGGGGAC TGGATAAAAG GGGGGTCGAC TGTTCCGGCT TTGCTTTATT GCTGCAAAAA GATATTTATG GCAATACCTT GCCCAGAAGG TCCAGGGACC AGGCTGATGC CGTGAAAGAA AAGAGTATGG GCCAGCTGAA TGAGGGCGAT CTGATCTTTT TTTCTTTCGG AGGCGGCGCA GTAGACCATG TTGGGGTTTA CCTGAACAAC AATTATTTTG TGCATGCCTC TACTACCAGG GGCGTTGTGG TCGACGATTT AAGTCTGCCT GCCTACCAAA GGGCTATTGT TAAGGCTGGA TCTTTAAAAA ACTAA
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Protein sequence | MNISSLLSGK NRYSMLLLLL VALFFSACSS RRNTVKPGST AAAKAADAMS HLKNRSLYKF ITDWTGVQYR LGGLDKRGVD CSGFALLLQK DIYGNTLPRR SRDQADAVKE KSMGQLNEGD LIFFSFGGGA VDHVGVYLNN NYFVHASTTR GVVVDDLSLP AYQRAIVKAG SLKN
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