| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1883 |
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| Symbol | |
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| ID | 8252987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2174913 |
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| End bp | 2177489 |
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| Gene Length | 2577 bp |
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| Protein Length | 858 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644935534 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_003092153 |
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| Protein GI | 255531781 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.245146 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACAGT ACAATGTGAT TAAGGCAAAG TACCCGGGTG CATTATTATT GTTCAGAGTT
GGAGATTTTT ATGAAACATT TGGTGAAGAT GCCATTAAAA CTTCCCAGAT ATTAGGCATT
GTACTGACCA GGAGGGGAAC TGGTCCCAAC GGCGCATTGG AACTGGCAGG CTTTCCGCAC
CATTCTTTAG ACAATTATCT TTCCAAGCTG GTACGGGCCG GCCAAAGAGT AGCCATATGC
GATCAGCTGG AAGATCCCAA AACCACTAAA ACAATTGTAA AAAGAGGCGT AACCGAGCTG
GTCACTCCTG GAGTAGCCTA TAATGACAAT ATTCTGAACC AGAAATCAAA TAATTATCTG
GCTGCGGTAT TTTTTGACAA AAATACAATA GGGGTGTCTT TTGCAGATAT TTCTACAGGA
GAATTCCATG TCGCACAAGG CAATGCAGAG TATATTGATA AACTTTTACA AGGTTTCAGG
CCCAATGAGG TTGTTTTTCA AAAGACCAAA AGAAAGGAAT TCCTGGAGGC ATTTGGGGAT
AAATTTTATA CCTATCATCT GGACGACTGG GCCTTTACCG GCGATTATGC CAATGAAACG
CTGACCAAAC ATTTTGAAGT AAATTCTTTA AAGGGTTTTG GGGTAGATAG ACTGCAGACC
GGTATTGTAG CTGCCGGAGT GGTATTACAT TATTTAAATG AAACTGAACA CCGCAACTTA
AAGCACATCA CCTCCATCTC CCGTTTGGAA GAGGATAAGT ACATGTGGCT CGACCGCTTT
ACCATCCGTA ACCTGGAACT CGTAAGTTCG GCCAATGACA ATGCGGTAAC GCTTTTTGAA
GTGCTTGACC AAACCAGCAC ACCAATGGGT GCCCGTTTGC TGCACAAGTG GATCATTATG
CCACTGAAGG AGTTGAAACC TATAGAAGAA CGCCTGGGCA TGGTTGATTT TCTGGTGAAA
CACGACGCGC TTTTACAGGA GTTCCTCTCG CACATCAAAC AGATCGGCGA TCTGGAAAGA
CTGATTTCCA AAGTGGGACT CCAAAAGGTA GGGCCAAGAG AGCTTTGCCA GCTTAAAAAA
GCATTGTACC ATATTGAAGC CGTTAAAAAT GTCGCTGAAG CCTCAAAGAA CCCCTTTTTA
TCGGTTCTTG CTGATCAGCT GAACCCTTGC TTAAGCATCC GCGAAAAGCT GGAAAGAGAA
TTACAGCAGG ATCCGCCGGC ATTATTGATC AAAGGCAACG TGATTGCCGA TGGCATAGAC
GAGGAACTGG ACAGGCTGCG AAAAATTTCT TTTGGAGGTA AGGATTATTT AGTGGAAATC
CAGAAAAGGG AGGCTGCCGC AACGGGTATC CCATCTTTAA AAGTAGCCTT TAACAATGTT
TTTGGCTATT ACCTGGAAGT TACCCATACC CATAAGGATA AGGTGCCTGC CGACTGGATC
AGGAAGCAGA CACTGGTTAG TGCCGAGCGC TACATTACCC CCGAGCTGAA GGAGTATGAA
GAGCAGATCC TGGGGGCAGA GGAAAAAATC CAGCAGATAG AAGTAAAGCT GTACAACGAA
CTGATGTACC AGGTAAGTAC TTATATAAAA CCCATCCAGC TGAATGCTTT TTTAATTGCC
CAGCTGGATG TATTGCTTTG CTTTGCCCAA CTGGCCGTTA AAAACCATTA TGTAAAACCA
GAGATCAATA AAGGCAAGGT ACTCGACATC AAAGGGGGTA GACATCCGGT TATTGAACAG
CGCCTGCCGG TGGGCGAGGC CTACATTACC AATGATGTGT TCCTGGATAA CGATACCCAG
CAGATCATCA TCATTACCGG TCCCAATATG TCGGGTAAGT CGGCCATTTT ACGCCAGACA
GGCTTAATCG TGCTCATGGG GCAAATGGGT TGTTTTGTTC CTGCCAAGGC CGCTGCTATC
GGACTGGTCG ACAAGATCTT TACCCGCGTT GGGGCATCGG ATAATTTGTC ATCCGGAGAA
AGTACGTTCA TGGTAGAGAT GAATGAAACC GCCAGTATCC TGAACAATAT ATCTGATAAT
AGTCTGATCC TGCTTGATGA AATCGGCCGG GGAACCAGTA CTTATGACGG GATATCCATT
GCCTGGGCCA TTGCCGAGTT TTTACATACG CATCCAACGG CCAGGCCTAA AACGCTGTTT
GCCACACATT ATCACGAACT GAATGAGCTG GCAACTACCA TGAACCGCAT CAGGAACTTT
AATGTATCTA TTAAAGAACT GGGCAATAAA GTGATATTTT TAAGGAAACT CATCCCCGGG
GGTAGCGAGC ATAGCTTTGG TATCCACGTG GCTAAGATGG CAGGTATGCC ACCTAAGCTG
ATCAACAGGG CCAACGAGAT CTTAAAGAAA CTCGAAATTG ACCGAACAGA AGGCCAGAGC
ATTAAGGACA GCATTAAAAA AGTACAGAAC CAGGCCTATC AGTTGCATAT GTTTGCTGTA
GACGACCCGA TTTTAGTTAA AATAAGGGAT ATGCTGAACA ACCTGGATGT AAACGTGCTG
ACACCCGTTG AGGCTTTGCT GAAGCTGGAC GAGATACAGC GTTTAATTAA ACAGTAA
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| Protein sequence | MQQYNVIKAK YPGALLLFRV GDFYETFGED AIKTSQILGI VLTRRGTGPN GALELAGFPH
HSLDNYLSKL VRAGQRVAIC DQLEDPKTTK TIVKRGVTEL VTPGVAYNDN ILNQKSNNYL
AAVFFDKNTI GVSFADISTG EFHVAQGNAE YIDKLLQGFR PNEVVFQKTK RKEFLEAFGD
KFYTYHLDDW AFTGDYANET LTKHFEVNSL KGFGVDRLQT GIVAAGVVLH YLNETEHRNL
KHITSISRLE EDKYMWLDRF TIRNLELVSS ANDNAVTLFE VLDQTSTPMG ARLLHKWIIM
PLKELKPIEE RLGMVDFLVK HDALLQEFLS HIKQIGDLER LISKVGLQKV GPRELCQLKK
ALYHIEAVKN VAEASKNPFL SVLADQLNPC LSIREKLERE LQQDPPALLI KGNVIADGID
EELDRLRKIS FGGKDYLVEI QKREAAATGI PSLKVAFNNV FGYYLEVTHT HKDKVPADWI
RKQTLVSAER YITPELKEYE EQILGAEEKI QQIEVKLYNE LMYQVSTYIK PIQLNAFLIA
QLDVLLCFAQ LAVKNHYVKP EINKGKVLDI KGGRHPVIEQ RLPVGEAYIT NDVFLDNDTQ
QIIIITGPNM SGKSAILRQT GLIVLMGQMG CFVPAKAAAI GLVDKIFTRV GASDNLSSGE
STFMVEMNET ASILNNISDN SLILLDEIGR GTSTYDGISI AWAIAEFLHT HPTARPKTLF
ATHYHELNEL ATTMNRIRNF NVSIKELGNK VIFLRKLIPG GSEHSFGIHV AKMAGMPPKL
INRANEILKK LEIDRTEGQS IKDSIKKVQN QAYQLHMFAV DDPILVKIRD MLNNLDVNVL
TPVEALLKLD EIQRLIKQ
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