| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1854 |
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| Symbol | |
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| ID | 8252958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2143281 |
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| End bp | 2145431 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644935505 |
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| Product | Polyribonucleotide nucleotidyltransferase |
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| Protein accession | YP_003092124 |
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| Protein GI | 255531752 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.499435 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGTAA TAAAAAAATC GTTCGATCTG GGCGATGGAA GAACAATCGA AATTGAAACA
GGAAAACTGG CCAAACAGGC TGATGGTGCT GTTGTTGTTA AAATGGGTGA CACCATGCTT
TTAGCTACTG TAGTTTCTAC TGTAGGTGCT AAAGCTGGGG TTGATTTTTT ACCTTTATCG
GTAGATTACC AGGAGAAATA TGCAGCCGCA GGGCGTATAC CTGGTGGTTT CCTTCGCCGC
GAGGCCAGGT TGTCTGACTA TGAAGTTTTA ATTTCACGTT TGGTAGACCG TGCTTTACGT
CCGATGTTCC CTGAAGATTA TCACTCCGAT ACCCAGGTGA TGATCTCCCT GATCTCTTCT
GATAAAAATA TAATGCCTGA TTGTTTGGCT GGTTTAGCTG CTTCGGCTGC TATTGCGGTT
TCAGATATCC CTTTCAATGG ACCAATTTCT GAGGTACGTG TGGCCAGAAT TGATGGTAAA
TTTGTGATCA ATCCTTATGT GACTGATTTA GAGCGTGCTG ACATAGAATT CCTGGTTGCC
GGTACAGAGA AAGACATCGT AATGGTAGAA GGTGAGTGTA ATGAGATTTC TGAAACTGAA
ATGGTTGAAG CAATCGAGTT TGCACACAAA GCGATCGTGA TCCAGGTTCA GGCACAAAAA
GAACTGGCTG AACTGGTGGG TAAAACTGTT AAACGTGAGT ATTCTCATGA AGACAGCAAC
CCTGAGTTAA AAGAACAGGT TTATGCCGCT ACTTATGATA AAGTATATGC CATTGCAAAA
AGCAACACCA GTAAAGGTGA AAGAGGTGAT GCTTTTGGTC AGGTGCTGAT GGATTTCATT
GCTACATTAG GCGAAGAAAT TGATGACGTA ACCGGCTTTT TGGCTAAAAA ATATTTCCAC
GATGTTCAAT ATGACGCCAT CCGTAACCTG GTACTGGATG AAGGTATCCG TTTAGATGGC
CGTGATGTAC GTACAGTGCG CCCAATCTGG AGTGAAGTTG GTTATTTGCC TGCTGCACAC
GGGTCTGCAG TGTTTACACG TGGTGAAACC CAATCTTTAA CTACGGTTAC ACTGGGTTCT
AAAGATGATG AACAAATGAT TGATGGTGCT TTTATTAATG GATACAATAA ATTCTTATTG
CACTACAATT TTCCTGGTTT CTCAACTGGT GAAGTTCGCC CGAACAGGGG TGCAGGCCGT
CGCGAGATTG GCCACGGTAA CCTGGCTATG CGTTCTTTGA AAAAGGTATT GCCCGGACTG
GAAGAAAATC CTTATACCAT ACGTATTGTT TCTGATATCC TGGAATCTAA TGGTTCTTCG
TCAATGGCAA CTGTTTGCGC AGGTACTTTA GCACTGATGG ATGCCGGTGT GAAAATCAAG
GCGCCTGTTT CGGGTATTGC TATGGGATTG ATCACCGACG AGAAAAGTGG TAAATATGCT
ATCCTTTCGG ATATTTTAGG TGATGAAGAT CATTTAGGAG ATATGGACTT CAAAGTTACC
GGTACTGAAA AAGGCATTGT TGCCTGCCAG ATGGACCTAA AGATCAATGG CTTGAAGTGG
GAAGTGTTAA CCAATGCTTT AAACCAGGCT AAAGAAGCAC GTTTACACAT CTTAAACGAG
ATGAAAAAAA CGATTGCTGC ACCACGTGAG GATTACAAAG CACATGCACC ACGTATTGTT
TCACTGAGCA TCGACAAAGA ATTTATTGGT GCGGTAATTG GGCCAGGCGG TAAAATTATA
CAGGAAATGC AACGCGAAAC TGGCGCTACC ATCTCTATTG AAGAAGTGGG CAACAAAGGT
ATCGTTGAAA TTTTTGCTGA CAATAAGGCT GCTATTGACG CTGCTGTTGG CCGCATTAAC
GCAATTGCTG CAAAACCGGA AATTGGTGCC ACTTACCAGG GTAAAGTAAA ATCTATTATG
CCGTTTGGTG CTTTTGTAGA GATCATGCCG GGTAAAGATG GCTTACTGCA CATTTCTGAA
ATAGACTGGA CACGTTTGGA AACGATGGAC GGTGTGTTTA AAGAAGGTGA TAAAGTTGAA
GTTAAGCTCC TGGATGTGGA TAAACAAGGT AAAATGAAGC TTTCCAGAAA AGCCTTATTG
CCGCGTCCGC CAAAACCTGA AGCTGCAGCT GCTACTGAAA ATAAAGCATA G
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| Protein sequence | MNVIKKSFDL GDGRTIEIET GKLAKQADGA VVVKMGDTML LATVVSTVGA KAGVDFLPLS
VDYQEKYAAA GRIPGGFLRR EARLSDYEVL ISRLVDRALR PMFPEDYHSD TQVMISLISS
DKNIMPDCLA GLAASAAIAV SDIPFNGPIS EVRVARIDGK FVINPYVTDL ERADIEFLVA
GTEKDIVMVE GECNEISETE MVEAIEFAHK AIVIQVQAQK ELAELVGKTV KREYSHEDSN
PELKEQVYAA TYDKVYAIAK SNTSKGERGD AFGQVLMDFI ATLGEEIDDV TGFLAKKYFH
DVQYDAIRNL VLDEGIRLDG RDVRTVRPIW SEVGYLPAAH GSAVFTRGET QSLTTVTLGS
KDDEQMIDGA FINGYNKFLL HYNFPGFSTG EVRPNRGAGR REIGHGNLAM RSLKKVLPGL
EENPYTIRIV SDILESNGSS SMATVCAGTL ALMDAGVKIK APVSGIAMGL ITDEKSGKYA
ILSDILGDED HLGDMDFKVT GTEKGIVACQ MDLKINGLKW EVLTNALNQA KEARLHILNE
MKKTIAAPRE DYKAHAPRIV SLSIDKEFIG AVIGPGGKII QEMQRETGAT ISIEEVGNKG
IVEIFADNKA AIDAAVGRIN AIAAKPEIGA TYQGKVKSIM PFGAFVEIMP GKDGLLHISE
IDWTRLETMD GVFKEGDKVE VKLLDVDKQG KMKLSRKALL PRPPKPEAAA ATENKA
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