Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1806 |
Symbol | |
ID | 8252909 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 2105724 |
End bp | 2106158 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644935457 |
Product | hypothetical protein |
Protein accession | YP_003092077 |
Protein GI | 255531705 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.897355 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000000117053 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAAAAGC GTGGCTTAGT AGTTGATGTA GCCTGTTTCT TATTTGTGTT GCTGTTTGTG TATGCTGCAG CGAGCAAAAT GCTGGAGCTT GATAAATTTG AAACACAATT GGGACGATCA CCAGTAATTA CCCGTTTTTC TTCGATTTTG TTGTGGTTAG TGCCAGGGTT AGAAATTTTG CTGGCCTTGC TGATGTTTTG GTCGAAAACT AAACTGTTTG CTTTGTATGG CTCATTTAGC CTGATGGTTG CTTTTACAGC CTACATCATT GTGATACTGA ATTTTAGTGA AAATATACCA TGCTCGTGTG GGGGCATTTT GCAGGACATG ACCTGGAGAC AGCATCTGGT ATTTAATGTA ATTTTTGTTT TGATGGCGGT AGTGGCTGTA TTGATTTATC CATCGAACAA TAAAAATATT GTTGCGCAGC AATAG
|
Protein sequence | MKKRGLVVDV ACFLFVLLFV YAAASKMLEL DKFETQLGRS PVITRFSSIL LWLVPGLEIL LALLMFWSKT KLFALYGSFS LMVAFTAYII VILNFSENIP CSCGGILQDM TWRQHLVFNV IFVLMAVVAV LIYPSNNKNI VAQQ
|
| |