Gene Phep_1796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1796 
Symbol 
ID8252899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2088604 
End bp2089683 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content33% 
IMG OID644935447 
Producthypothetical protein 
Protein accessionYP_003092067 
Protein GI255531695 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.105142 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00212218 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATAAGC AATTCGGAGA GGACAAAATT ATAATCCTAT TGGGTGCCGG GGCGAGCTGT 
GACGCAGGTA TGCGTAATTC TACCCAAATG ATAACAGACA TTGAATCCCT ATTGAAAGGA
GAATGGTCAA GTTTTAAAGA TTTATACAAC TATATACAAA GTTCCCACTA TCATTTGGAG
AGAATCAAAG GTGTCGATTC AAAATCGATA ATGTTCAATA TAGAGAATTT AGTAGGATTG
CTAAATGTTA TCATCAATAT CTCGGAAAAA AAAGTTGATG TTTACCCTTT TATTGGCAGT
TGGGAAAAGG AATTACTTGT TGTAGCGGGT CACAAACTTG AATTGGCAGT GAAATTTAAA
GAGGAAATTT TAAGTAAGTT AAAGAATACA TGGCTTAGCC CCGATGACTT TAAAAGAAAA
AGCGCTTATT ATAAGAAGTT AAAAGAAACA GGATATACTA TGCCATTGCG TATCTTCTCA
TTAAATTATG ATATGTGTGT TGAAGAAAAT CTCGGAATGG AAAATATTGA ACGGGGTTTT
GGAGAGGATA AAATTTGGGA CTATCGAAGA TATGAGCCTT CTCAAGAGCA AGAGATAAGC
TATTTCCTTT ATAAATTACA TGGCTCTTTG GATTGGAAAA GAAACACTCA AAACAGGCTG
ACCTATTCGG ATTCTATTTC TTCAATAAAT CCTTTAAATA TGGAAATCAT TTTTGGTGTG
CAAAACAAAC TACAATCGTA TGATCCATAT TTATTCTATT TCTATGCATT TCGTGAGGCG
TGCATAAGGT CTGAACTTAT TGTTATAAGT GGTTATGGAT TTTATGATCA GCATATCAAT
GATAATTTAT CAAGCGCAAT CGAACTTGAT CCTAACAAGA GGATTTTAGT TAACGTTTAC
GAATGTGACA GTTTTGATCA GGACTCTTAT ATAAAGAATT TAAGTGCCTT GCTAAAAATA
AATTCTGAGA ACATAACTGT TCAAAATTGC TCTGCCCAAG AGTTTTTCAA TAATTGTTTA
AATCTGGAAT ATTTTTCGTC ATTGTTTCCA GATGATGATA ATGAGAATGT CTTACCCTAA
 
Protein sequence
MNKQFGEDKI IILLGAGASC DAGMRNSTQM ITDIESLLKG EWSSFKDLYN YIQSSHYHLE 
RIKGVDSKSI MFNIENLVGL LNVIINISEK KVDVYPFIGS WEKELLVVAG HKLELAVKFK
EEILSKLKNT WLSPDDFKRK SAYYKKLKET GYTMPLRIFS LNYDMCVEEN LGMENIERGF
GEDKIWDYRR YEPSQEQEIS YFLYKLHGSL DWKRNTQNRL TYSDSISSIN PLNMEIIFGV
QNKLQSYDPY LFYFYAFREA CIRSELIVIS GYGFYDQHIN DNLSSAIELD PNKRILVNVY
ECDSFDQDSY IKNLSALLKI NSENITVQNC SAQEFFNNCL NLEYFSSLFP DDDNENVLP