| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1784 |
|---|
| Symbol | |
|---|
| ID | 8252887 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 2079018 |
|---|
| End bp | 2079443 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 644935435 |
|---|
| Product | Endoribonuclease L-PSP |
|---|
| Protein accession | YP_003092055 |
|---|
| Protein GI | 255531683 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.164799 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0106753 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAT GTCCACTTAT TTTCCTTTTG GTGCCCCTAT GTCTGGCCGG TTGCAGTATT
GAAAGAAAGA CTTATAATCC CACAGGGGCT GCATTTTCAC AAGCCTACGG TATTAAAAAT
TATAAACAAT TGGTCTTTGT CAGCGGGCAG GTACCGGAGG ATGAAAAGGA AAACATTCCC
GATAACTTTC GTGACCAGGC GGCACTGGCC TGGAAAAACG TGGAAACGCA ACTAAAAGCT
GCCAAAATGG GCCTGAAGAA CATTGTGAAG TACACGATAT ACCTTTCCGA CCGAAAATAC
CGCAGGGAAA ACTATGAGGT GCGCTATAAA GTGCTGGGTG ATCATCAACC GGCCATGTCC
ATTGTTATCA CCGGCATCTA TGATGAAAAA TGGTTGCTGG AAATTGAAGC CATAGCCGCA
AAATAA
|
|---|
| Protein sequence | MKTCPLIFLL VPLCLAGCSI ERKTYNPTGA AFSQAYGIKN YKQLVFVSGQ VPEDEKENIP
DNFRDQAALA WKNVETQLKA AKMGLKNIVK YTIYLSDRKY RRENYEVRYK VLGDHQPAMS
IVITGIYDEK WLLEIEAIAA K
|
|---|
| |