| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1748 |
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| Symbol | |
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| ID | 8252850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2057589 |
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| End bp | 2058401 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 644935398 |
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| Product | helix-turn-helix- domain containing protein AraC type |
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| Protein accession | YP_003092019 |
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| Protein GI | 255531647 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00130809 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAGCATT TATCCAAATA CTTGACCAAA GACATTAAGC TTTCCAGCTA CGAAGACAAA
CTGTTCAAAT CAGACCTGAT GTTCGATGAT CACATGCTGG TTTGGTTTAT TTCTGGAGAA
ACAAAGATTA TACAGGCAGA CAGAACATTT TATTTCAAAA CCGGAGATAT TTTTCTGATC
CCAAGAAATG AACTGGCAAC GATCATCAAT TATCCAAAGA ATGGTCTGCC ACATAAAACG
GTGGTGATGC ATCTGTCAAC CGATCGACTG AAGCAATTTT ATGAAAAAAT AGAGATCAGA
AAAGATTTAC AGAATGAGCA GAAAATATAC AGTTTTAGTA ACCACCCCTT ATTAGAAAGC
TGCCTGGCTT CGCTAATACC CTATTTCAAT ATGGAGGGAG AATTTCCCGA AAGCCTTGCT
TCCTTAAAAA TTATAGAAGC CATTAGCATT CTAAGAATAA TAAACCCAGA GGTAGATAGT
GTTTTGGCAA ATTTTGATGC TCCCGGAAAG ATTGACCTGG TGAATTTCAT GCAACGGAAT
TTTATGTTCA ATATGTCATT AGAAAAATTG GGATACTTAA CAGGCCGAAG TTTATCTACT
TTCAATAGGG ATTTCAAGAA GCTATTCCAT ACAAGCCCTC AAAAATGGTT GACTGAGAAA
AGGCTTGAAT TAGCTCACTA TCACTTATCC GAAAAAAAGA AAAAACCAAC TGAGGTTTAC
CTTGAAGTTG GCTTTGAAGA TCTGTCTCAT TTTTCCTTTA TTTTTAAGAA GAAATACGGA
GTATCTCCTA ATCAAATATC ATTAGTTAGA TAA
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| Protein sequence | MEHLSKYLTK DIKLSSYEDK LFKSDLMFDD HMLVWFISGE TKIIQADRTF YFKTGDIFLI
PRNELATIIN YPKNGLPHKT VVMHLSTDRL KQFYEKIEIR KDLQNEQKIY SFSNHPLLES
CLASLIPYFN MEGEFPESLA SLKIIEAISI LRIINPEVDS VLANFDAPGK IDLVNFMQRN
FMFNMSLEKL GYLTGRSLST FNRDFKKLFH TSPQKWLTEK RLELAHYHLS EKKKKPTEVY
LEVGFEDLSH FSFIFKKKYG VSPNQISLVR
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