| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1709 |
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| Symbol | |
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| ID | 8252811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2029402 |
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| End bp | 2031123 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644935361 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003091982 |
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| Protein GI | 255531610 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.131317 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00943188 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTAAGA TTATGAAAAA GATAGTTATA TGCTTTACAG CCTGCTTATA TTTAGCACTG
GCCGCAGGTT GTAAAAAAAC ACTGGTGGAA GAACCACATT CTGATTTAAC TCCTGAATTT
TTTTCCACCG CTCAGGGTTT TCAAAAAGGA CTTGAAGCTG CTTATGCAGG AACCCGCTCC
TTCTGGGGAA ATCAAAACCT TTTTACGATG ACAGTAATAG GCACAGATGA ATTCTATACC
GGAAAGGATG GAAACAACAA CATCAACAAA TACAATAGCA ATTACGATAC GGCTAATGGA
ACCGTAGAGG CCATCTGGAA AGACTGTTAT ATGAACATTA ATACTTGTAA TGGTGTAATT
GATAATTCTG CTGCAGTTAC CGGATTGGAT GATAACCTTA AAAGCAGGAT TGTGGCCGAA
ACTAAATTCC TTCGGGCCAA TTACTATTTT ATCCTGGTAC AATTTTGGGG TGATGTTACC
TTAAACAAGA CTTTCCAGAG CACGCCCATC ACGTCGGCAA CGCGCACGCC AATGGCAGAA
GTATATGATT TTATTGTGAA AGACCTACAG GATGCCATTG CTACCCCAAG TTTTTATGCC
AATCCAAAAT CATCAGGGGC ACTACCCGGG GTAGCTACAA AAGCAGCTGC ACAACATTTG
CTGGCCAAAG TATATTTAAC CCGGGCAGGA TCTTCGGCAA AAAAAGCAAA TGATTATATA
GATGCTTACA ATATGGCCAA AACCGTAATT ACAACCAGCG GACTGTCATT GCTGCAGGAT
TTTGGTGATG TGTTTGCAGA AGGAAATGAA AACAGCAATG AAGTGATCTG GAATGTTCAG
CATACCTCTA ACCTGGCTTA TAATGGTCCA AATAACAGTG GAGGGGCTGA TAATGTATTG
AACCACATGT GGGTGCCGCA GTACGAACTG CGCCCTGGTA TGCAGCGTTC CGTAACTTAT
GGTCGTCCAT ATATCCGTTG CGTGCCTACT GCATGGCTAA CCAATGTGGC TTTCCAGGAA
AGGGTAAATG ACACCCGTTA CAACAAAACC TTTTTAACTA CCTGGATCAG TAACAATGCC
TCTTCTCTTC CTAAATGGGA AGCACCAATA CCACCGGGAG CTCCAGCTAA TGCTGCCGTT
GGGCAAGTCA AATTCACTGT TGGCGATACA GCTATATTTA TGCCGGGTTT TGATGTAAGT
GATGCTAAAA TTGCTGCTAC CAGGTATCTG CTGATCCCTC CACGTAAATA TGACATCACC
TTGTCGCCCT ATATGAAAAA GTATAACGAT ACCAAACGTG CTGATTTAAA TTATCCTTCT
ATCAGACCGG TGATCGTATA CCGCCTGGCA GAAACTTATT TAATTGCTGC AGAGGCTGCA
TTTATGGGTG GAGCTACCAT GACAGATGCC CTTGATAACA TCAATTTTGT AAGGAGAAGG
GCCGCCTATC CTAACGCCAA TCCGGCAGTA ATGAACGTGA CTACCATTCC TTCACTTGAT
TTTATCCTGG ATGAACGCAC AAGGGAGCTG TGTGGTGAAA ATGTAAGGTG GTGGGACCTG
GTGCGGACCA ATAAATTGAT TGATCGGGTA AAAACTAAAA ATTACAATCC TGAGGCAGCA
GCCAATATTA AGCCTTTCCA TGTTTTAAGG CCAATACCTC AAAAACAGAT TGACGGGGTT
ACCACAGGAC CTAAATATCC TCAAAATGAG GGTTGGTTTT AG
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| Protein sequence | MIKIMKKIVI CFTACLYLAL AAGCKKTLVE EPHSDLTPEF FSTAQGFQKG LEAAYAGTRS
FWGNQNLFTM TVIGTDEFYT GKDGNNNINK YNSNYDTANG TVEAIWKDCY MNINTCNGVI
DNSAAVTGLD DNLKSRIVAE TKFLRANYYF ILVQFWGDVT LNKTFQSTPI TSATRTPMAE
VYDFIVKDLQ DAIATPSFYA NPKSSGALPG VATKAAAQHL LAKVYLTRAG SSAKKANDYI
DAYNMAKTVI TTSGLSLLQD FGDVFAEGNE NSNEVIWNVQ HTSNLAYNGP NNSGGADNVL
NHMWVPQYEL RPGMQRSVTY GRPYIRCVPT AWLTNVAFQE RVNDTRYNKT FLTTWISNNA
SSLPKWEAPI PPGAPANAAV GQVKFTVGDT AIFMPGFDVS DAKIAATRYL LIPPRKYDIT
LSPYMKKYND TKRADLNYPS IRPVIVYRLA ETYLIAAEAA FMGGATMTDA LDNINFVRRR
AAYPNANPAV MNVTTIPSLD FILDERTREL CGENVRWWDL VRTNKLIDRV KTKNYNPEAA
ANIKPFHVLR PIPQKQIDGV TTGPKYPQNE GWF
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