| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1708 |
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| Symbol | |
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| ID | 8252810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2026269 |
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| End bp | 2029397 |
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| Gene Length | 3129 bp |
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| Protein Length | 1042 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644935360 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003091981 |
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| Protein GI | 255531609 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0323206 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAATC AAACTTCTAC TCTTCGTTGG TGTATTGTAG TTTTTTTATT GTGTTGTTGT
GTGGTGGATT CATATTCGAG GGGTAACACA ATCAGTAATG AAAATTATTC TACTAAAAAA
GTAACCGTAT CAGGAAAAGT TTCTGATGCT GAAGGCCCAT TGCCAAGTGT GATCGTAAAG
TTAAAAGGAA CAAACACCTC TACTTCAACC AACGCAAATG GAAATTACAG TTTAACAATA
CCCGATGGTA CAGGTACCTT GGTTTTCTCT TCAATTGGGT ATGTTACCCA GGAAGTTGCG
GTTCAAAACA GAACTACAAT AAATGTAACG CTTGTCGCAG AAAATAAAAC TTTATCAGAG
GTGATCGTTG TTGGTTATGG AACACAAAAG AAATCTGATA TTACAGGTTC TATAGTCTCC
ATCAGCGAAC AGGCACTTAA AGATGTGCCT GTTGCAAATC TGTCTCAGGC CCTTCAGGGA
AGAGGTGCCG GTATAGACAT TCAAAAAAGC GGTGGTAACA GTAAGCCTGG TGCTTCGCCT
GTCATCAGGA TTAGGGGTGC CAGATCACTG GGAGCAACTA ATGATCCGCT ATTTGTTGTT
GATGGTATTC CTTATAATGG GAATATCAAT GACCTGAACC CTGATGATGT GGTATCTGTC
GAAGTGCTTA AAGATGCTTC CTCTACAGCT ATTTATGGGT CCAGAGGTGC AAATGGTGTT
ATCCTGGTGA CTACCAAGCG TGGGAAAATT GGCGAAGCTG TAGTTACTTA TAGCGGTTAT
GCCGGAGTGA CCAAAAACCT GGGTAAAATT GATGTGATGG ATGGTAAACA ATTTGAGATG
TTAAAGAAAT GGGCTGTAGT AAATGGAAAT TTTGTAAGCG GGGCCCCAAA ATACACAGGT
GTAGATGACC CCCGGATTAT GACTGATGGT ATTTTTGCCC CTCAGGAGCT TGAGTCTATC
AAAATGGGCA GAAGTACCGA CTGGCAGGAC CTGATCTATA AAAATGGCAT CACTACAAAC
CATCAGATCG GTGTGTCAGG TGGATCAGAA AAAACGCAGT ATGCCCTGTC CGGAGGCTAT
CATAACGAAA CCGGAATTTA TCCGGGCCAG TCTTTTGAGC GTTTTACAGC TAAAATAAGC
ATAGAGCAAC AATTGGGTAA ATATGTTCGG GTAGGGTTGA ACAGCATAAA CAATTTCAGC
TACACCAAAG GTGAGGGTGC CAACCCCATG GGGCAAGTGC TTCGAGCCAG TCCGCTTGCT
ACTCCTTATG ATGAAACTGG TAAATTATGG GGCTTTGTGC CCGGCAGTGC AAACCAGGTT
TGGAATCCAT TAGGTGATTT TGTAGAAGGC GCTAAAATAG AAAACAGAAA ACGTTTTGGA
ACATTTACCA CCTTATACCT GGAAGCTACT TTGGCCCCTG GTTTAAAATA TCGCTTTAAC
GGAGGTGCAG AAATCAAATC AGATGTTTAC GGAAATTTTT ATGCAAGCGC AACTTCAAAT
AATCTGGGTG GTTTATCCAC TTCCAGCAAC CGTACTGGTT TCAGAACGGA TTATACACTG
GAAAATCTAC TTACCTACGA TAAGGTAATT GCTGATCATC ATAAAATAAA CTTCACAGGA
TTGTTTTCTT TACAGGAAGC TCAGAGTCAG TCAAATTCCT TTAACAACAA CAACCTGATT
GCAGATAACG TATGGTACTA CAACCCTCAG CTGGGCTCCA ATCTGGTAGG ATCAGGAGAT
TATAGTAAAT GGTCACTGAT ATCCTATATG GGCAGGCTTA ATTACGGTTT CAAGGATAAG
TATCTGTTAA CGCTTACCAT GCGTTCTGAT GGTTCTTCCC GTCTGGCACC AGGAGGTAAA
TATAAAGTAT TCCCTTCTGC GGCCGTAGCC TGGAACCTGA TCCAGGAAGA TTTTATTAAA
AGTGTAGGCT CAATTTCAAA TTTAAAACTC AGGGGCTCAT ACGGAATGGT AGGTAATACC
TCAATAGATG CCTATGCAAC ATTAGGTGCG CTTACAGGGG TCAATTATAA TTTTGGTGAC
AAAACAACTA CCGGTTTATA TCTTTCCAAT GTACCAAATC CGGCATTGAC CTGGGAAAAC
AGTACTACGG CAAACGTTGC TGTTGACTTT GGTTTTTTAA AGAACAGAAT TACCGGTTCA
ATAGAAGCTT ACCACGTTTA TACTGATAAA TTATTGCTGC CACAAAACCT TCCTTTCACC
TCCGGAATTC CAAATGCAGT TTTAACCAAT GTTGGTAAAT CTGAAAACAG GGGTCTGGAA
TTTCAGGTGA GTACCGTAAA CATTGATGGT GATGGTAAGA AGAAATTCAG CTGGAGTACC
GACATCAATG TTTCCATCAA CAGAGGTAAA ATTACACAGT TACAGGAAGG CGTAATTAAC
GACATTACGA ATAACAGGTT TGTAGGTCAG CCTATCGGAA CCATTTATGA TTATAACAGG
GTGGGCATAT GGCAAAATAC GCCTGCCGAT ACAGCCGAAG CTAAAAGATT AGGGCTTACA
GTAACTACGG GTACGGGTTC TGTAATCGGG AACATCAGGC TGGCGGATAC AAACGGGGAT
GGTAAGATCA CAGCAGATGA CCGGATATTT ATAGGATCGA GCCAGCCCAA ATGGTCTGGA
GGCATGACCC ACCGTTTTGC CTATAAAAAT CTTGATTTTA CTGTTGTAAC CTTTGGAAGG
TTTGGAAGTA CCATTATCAG TAGCGTGCAC AATAGCGGAT TTGCCAATAC CTTTCAGGGA
AACTATAACA ATCTTGATGT AAATTACTGG ACACCAACAA ACCATGAGAA CTATTGGCCT
AAGCCAAATG CCGCATCAAC CAATACTCCT AACAATTCTA CCTTGGGTTA TTTTGATGGT
ACATTTGTGA AAATCAGGAG CCTGGCATTG GGCTATAATT TACCTGCACC GCTCGCCGCT
AAGATAGGGG GAAGGTCATT GAGGGTATAC GCTTCTGTAA ACGACGCATT TATTCTTTTC
TCCAAGTACA GAAATATATA TAAGGGTATA GATCCCGAAG CGATCAGCGG AAGTAACAAC
AGAAGTTCTG TAGGTGTAGA TACACCAGCA AGCTATTCTA TGACTTTTGG TTTAAATATG
AGTTTATAA
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| Protein sequence | MINQTSTLRW CIVVFLLCCC VVDSYSRGNT ISNENYSTKK VTVSGKVSDA EGPLPSVIVK
LKGTNTSTST NANGNYSLTI PDGTGTLVFS SIGYVTQEVA VQNRTTINVT LVAENKTLSE
VIVVGYGTQK KSDITGSIVS ISEQALKDVP VANLSQALQG RGAGIDIQKS GGNSKPGASP
VIRIRGARSL GATNDPLFVV DGIPYNGNIN DLNPDDVVSV EVLKDASSTA IYGSRGANGV
ILVTTKRGKI GEAVVTYSGY AGVTKNLGKI DVMDGKQFEM LKKWAVVNGN FVSGAPKYTG
VDDPRIMTDG IFAPQELESI KMGRSTDWQD LIYKNGITTN HQIGVSGGSE KTQYALSGGY
HNETGIYPGQ SFERFTAKIS IEQQLGKYVR VGLNSINNFS YTKGEGANPM GQVLRASPLA
TPYDETGKLW GFVPGSANQV WNPLGDFVEG AKIENRKRFG TFTTLYLEAT LAPGLKYRFN
GGAEIKSDVY GNFYASATSN NLGGLSTSSN RTGFRTDYTL ENLLTYDKVI ADHHKINFTG
LFSLQEAQSQ SNSFNNNNLI ADNVWYYNPQ LGSNLVGSGD YSKWSLISYM GRLNYGFKDK
YLLTLTMRSD GSSRLAPGGK YKVFPSAAVA WNLIQEDFIK SVGSISNLKL RGSYGMVGNT
SIDAYATLGA LTGVNYNFGD KTTTGLYLSN VPNPALTWEN STTANVAVDF GFLKNRITGS
IEAYHVYTDK LLLPQNLPFT SGIPNAVLTN VGKSENRGLE FQVSTVNIDG DGKKKFSWST
DINVSINRGK ITQLQEGVIN DITNNRFVGQ PIGTIYDYNR VGIWQNTPAD TAEAKRLGLT
VTTGTGSVIG NIRLADTNGD GKITADDRIF IGSSQPKWSG GMTHRFAYKN LDFTVVTFGR
FGSTIISSVH NSGFANTFQG NYNNLDVNYW TPTNHENYWP KPNAASTNTP NNSTLGYFDG
TFVKIRSLAL GYNLPAPLAA KIGGRSLRVY ASVNDAFILF SKYRNIYKGI DPEAISGSNN
RSSVGVDTPA SYSMTFGLNM SL
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