Gene Phep_1657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1657 
Symbol 
ID8252759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1957583 
End bp1959097 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content30% 
IMG OID644935310 
Producthypothetical protein 
Protein accessionYP_003091931 
Protein GI255531559 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.356019 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.111731 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGGTA TTAAAATTTT ATTGGTATTA ATGGTATATT TATTTTCCAT CAAGGATACT 
GCATGCGCTA TTACAAAAAT TGAAAAAAAA ATAAATTTTC AAGGAGTTAT TAAAGATAGC
AAAAAGAGAA GGATCACTGA AGTTGCAATT TCTTATAATC TTGAGGACGG ATTCACTGGT
GGCAATGGGA ATATTCCATT TACAGTTGAA GTAAAGAATA ACGGTTATTT CAAGTTTGAA
CTACCAGACA TCGGTAGACC TCTCAACTTT AACATGAGCA TACAGAGCCC AGATGAATTT
CTTGGAACTC TAATTGATTA CTATGCGGAA TCGGGTGACA ACATAGAAGT CTTATGGAAG
ATAGGGGAAT TAAATAAAGA TACAGTTGAG TTTTCTGGCC AAGGATCTGG TAAATATAAC
TTAATAACAA CTCTGCAAAA CCAATTTTGG AGAGATAAAA AGACACTGGG TGAAATTAAT
ATTCTAACTT TCAAAGATTC ATTGGATCTT GCATATAAAC TTGACTGCTA TTCAAAATTG
ACAAAAGATT TTGAAGCCAA TAAAGTTCAT AAGTTAGAAA TGGTGAAATA TGTCAGTCCA
ATTATTAAGA ATCTAATTCA GGTTGAATTT GCACGATATT ATGATGACTG GGCTTTTATA
ATTGAGCTTT TGTATATAAA AAACTCAAAT TTTAGAAGGC AAATCAGCCA ACATTATTTG
GAACATACAA ATGAATTTTT TTATAGTCCA GGAATAATAC ATAGGATGTG TAGATTGTAT
TTGTATAGCT TAGCTGATAG AATTAAACTG AATATGCTAA TTGGAAAACA AGCAAATGCT
GTTAATGTAG TATCTTATTA CAATTTACTT AAAAAAAGTT TTGATGGTGT TATAACAGAT
AGATTGTTAG GTTCATTTAC ATTTAACAAA TTTATCTTGG TTAATCTAGA ACCATTTTCT
CCTAAAGTCA TGGACTCTTT AATAGCTGAT GCTGAAAATA GTGTAAAGAC TTCAAATATC
AAACAAGCAA TATCAAAAGT ATTAAGAACA AAAAGTGGGA CCAAATTGCT TTCCTCTTCA
TTTATAGACC TGAATAACGA TGAGATTTAT ACAAATTCGT TAGAAGGAAA GGTGGTTCTA
ATAGATGTTT GGTTTCTTGG ATGTAGCGGT TGCGCTCAAT TTCACAAAAT GTTTGAAAAC
GAAGTATATC CATTCCTAAA GAAGAATAAA AGTTTTGTAA TTCTGAGTGT CAATATTGAC
AAAAAGTTAG AAAATTGGAA AATGGGTATA AAATCTAATT TATATACCTC TGATGATTAT
ATAAATGTAA CAACAGGAAA TGGACTAAAC CATCCCTTTA TAAATTATTA CAATATTAAA
GGGGGGCCAT ATTTAATGTT AATAGATGTA AATGGATATA TATATTCACG ACTGGATCCT
ATTCAGGCCG TAGATTTAAA ATACATGTCC AGATTAGTGA AAGACGCAAT GATTAGAAGG
ATAATTAGCA AATAA
 
Protein sequence
MEGIKILLVL MVYLFSIKDT ACAITKIEKK INFQGVIKDS KKRRITEVAI SYNLEDGFTG 
GNGNIPFTVE VKNNGYFKFE LPDIGRPLNF NMSIQSPDEF LGTLIDYYAE SGDNIEVLWK
IGELNKDTVE FSGQGSGKYN LITTLQNQFW RDKKTLGEIN ILTFKDSLDL AYKLDCYSKL
TKDFEANKVH KLEMVKYVSP IIKNLIQVEF ARYYDDWAFI IELLYIKNSN FRRQISQHYL
EHTNEFFYSP GIIHRMCRLY LYSLADRIKL NMLIGKQANA VNVVSYYNLL KKSFDGVITD
RLLGSFTFNK FILVNLEPFS PKVMDSLIAD AENSVKTSNI KQAISKVLRT KSGTKLLSSS
FIDLNNDEIY TNSLEGKVVL IDVWFLGCSG CAQFHKMFEN EVYPFLKKNK SFVILSVNID
KKLENWKMGI KSNLYTSDDY INVTTGNGLN HPFINYYNIK GGPYLMLIDV NGYIYSRLDP
IQAVDLKYMS RLVKDAMIRR IISK