Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1626 |
Symbol | |
ID | 8252728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 1926425 |
End bp | 1926790 |
Gene Length | 366 bp |
Protein Length | 121 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644935280 |
Product | helix-turn-helix domain protein |
Protein accession | YP_003091901 |
Protein GI | 255531529 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.365666 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGAAA TTCTATCAAA GAAAGAGATT GGTGAACGCA TAAAGGACTT AAGAACGCAG CACAACCTTT CGCAAGCATT TATTGCCAAT ATTTTAAATT TATCAAGAAG TAATTATTCT CAAATAGAAC TTGGCAACCA GTATCCTTCG TTCAACACCC TACACGAAAT CGCCAGGTAT TATAGCAAGA CCTATGATTG GCTGCTACAT GGCACAGATA CTAAGGCCGC AACGGAAAAT CCTGCCAAAA TAGACCTTAT TTTAAATGAC CTCGAAACTT CATTCAGGAG TTTCACCAGC TCACTAAAAA AACTGGAACA GGAATTAAAC CACATCAAAT CAAGAAGAGC CAAGGTTAGG GTATAA
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Protein sequence | MQEILSKKEI GERIKDLRTQ HNLSQAFIAN ILNLSRSNYS QIELGNQYPS FNTLHEIARY YSKTYDWLLH GTDTKAATEN PAKIDLILND LETSFRSFTS SLKKLEQELN HIKSRRAKVR V
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