| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1610 |
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| Symbol | |
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| ID | 8252712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1908330 |
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| End bp | 1910033 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644935264 |
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| Product | cytochrome c biogenesis protein transmembrane region |
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| Protein accession | YP_003091885 |
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| Protein GI | 255531513 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4232] Thiol:disulfide interchange protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.073861 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTAA ACCATCACCA TATATTTATG ACCTTACGGA TCTTCATTCT CGGGCTTTTT
ATTTTGCTGG GTACCAGCAG TTATGTCCAT GCCCAGGAAG CCGATACGAG CCTTTCCGGT
CTGGAGTTTA CCGAAATTGC CCCTGATACT GTCAGCCCGG CTGATACGGT TGCAGCCAAA
GCTGCAGTTG TGCCGGCAGC TGGCGTAGCC GGCATTGCGG CTGCACCGGG CAATAAAGCC
CCTGCAGCTG AAGCGGACAA AACCCTTTGG GGAACCTTTA TAGCCGGACT GGTAGGTGGT
TTTCTGGCCT TTCTGATGCC CTGCATCTTT CCCATGGTGC CCCTTACCAT CAGTTATTTT
ACCAAAAGGG CAGGCAGTAA AGGCAAAGGC ATTGGCCAGG CCCTGATCTA TGGGCTTTCC
ATCATTGTCA TTTATGTAGG TTTTGGCCTG CTGATCACTG TTTTGTTCGG ATCGGCCGGC
CTGAATGCAT TGAGTGCAAG CGGTTTGTTC AACTTTCTGT TCTTTATTTT GCTGGTGGTA
TTCGCCATCT CCTTTTTCGG GGCTTTCGAG ATCACCCTGC CCAGTGCTTT CGTCAATAAG
ATAGACAACA AGGCCGATAA CAGCAAAGGC CTGGCAGGCA TCTTTTTTAT GGCTGCTTCA
CTGGCCCTGG TCTCTTTCTC CTGTACCGGT CCGATCATCG GTACCTTACT GGTAGATGCC
AGTTCCAAAG GAGAGTTACT GGGCCCGGCC GTCGGTATGT TTGGTTTTGC CCTGGCCCTG
GCCCTTCCCT TTACCTTATC GGCCATATTT CCCGGCTTTT TGAGCAGTAT GCCCAAATCC
GGAGGCTGGC TGAACAGCGT AAAGGTATGC CTGGGTTTCC TGGAACTGGC CCTGGCCTTA
AAGTTTTTGT CATCGGCCGA CCTGGCCTGG CACTGGGAAT GGTTTGACCG GGAGATCTTC
CTGGTGCTGT GGATCGTGAT CTTTGTGCTG ATGGGGATCT ATTTACTGGG GAAGATCAGG
TTCTCTCACG ACAGTGAGGT ACCTTATATA TCTGTTCCCA GGTTGTTCCT GGCCATTCTT
TCTTTTTCCT TTGCGCTGTA CATGGTGCCC GGGCTGTGGG GCGCGCCGGT AAGCGTACTG
AGCGGACTGG CCCCACCAAT GAATACCCAG GACTTTATCC TGAACGGCAA CCAGTCCTCA
GCTTCAGGAA GTGTAGCTGC AGATTTTCCG GCCCATGTCA AATACAGCGG ATCTTTAAAA
GCCCCGGTAG GTTTCCATCC TTTCTTTGAA CTGGAAGAAG GACTGGCCTA TGCAAAAAAA
GTAAACAAAC CTGTACTGCT TGATTTTACA GGGCATACCT GTGTAAACTG CCGCAGAATG
GAAGACCTGG TATGGGTGGA CCAGGAGGTG GGCAGACTGA TCAAAGAGGA ATATGTACTG
ATCCAGCTGT ATGCCGACGA CCGCAACATC AAAATGGAGA AAGACAAGGT CCATTATTCC
AGTGTGCTGA AACGCAATAC GGATGACCTG GGTTATTGGA ACCTGGATTT CCAGGCTACA
AAATACGGCT CCAATGCACA ACCCTTATAT GTACTGGCGG GTCATGACCT GAACCCACTG
GTAAAACCCC AGGGAGCTAT ATTCGATGCA AAGGAATATG CAGCTTACCT GCAAAGCGGC
TTAAACGCAT TTAAGGGGAA ATAA
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| Protein sequence | MKLNHHHIFM TLRIFILGLF ILLGTSSYVH AQEADTSLSG LEFTEIAPDT VSPADTVAAK
AAVVPAAGVA GIAAAPGNKA PAAEADKTLW GTFIAGLVGG FLAFLMPCIF PMVPLTISYF
TKRAGSKGKG IGQALIYGLS IIVIYVGFGL LITVLFGSAG LNALSASGLF NFLFFILLVV
FAISFFGAFE ITLPSAFVNK IDNKADNSKG LAGIFFMAAS LALVSFSCTG PIIGTLLVDA
SSKGELLGPA VGMFGFALAL ALPFTLSAIF PGFLSSMPKS GGWLNSVKVC LGFLELALAL
KFLSSADLAW HWEWFDREIF LVLWIVIFVL MGIYLLGKIR FSHDSEVPYI SVPRLFLAIL
SFSFALYMVP GLWGAPVSVL SGLAPPMNTQ DFILNGNQSS ASGSVAADFP AHVKYSGSLK
APVGFHPFFE LEEGLAYAKK VNKPVLLDFT GHTCVNCRRM EDLVWVDQEV GRLIKEEYVL
IQLYADDRNI KMEKDKVHYS SVLKRNTDDL GYWNLDFQAT KYGSNAQPLY VLAGHDLNPL
VKPQGAIFDA KEYAAYLQSG LNAFKGK
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