| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1578 |
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| Symbol | |
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| ID | 8252680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1863879 |
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| End bp | 1866743 |
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| Gene Length | 2865 bp |
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| Protein Length | 954 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644935232 |
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| Product | glycoside hydrolase family 2 sugar binding |
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| Protein accession | YP_003091853 |
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| Protein GI | 255531481 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.579068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0815371 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGAA GGACTTTTAT CCAAAATACA TCAATCGCCA CCTCATCCTT AGTTTTTTTT
AATCAATTTG AGTCTTTAGC GTTCTCAAAA TCCGATCAGG ATTTATATAC CCTCTTTAAA
AATCCCCCTG CCAATTACAG GCCCTTTGTA CGGTGGTGGT GGAATGGGAA CAAAATACAA
AAGAAGGAGT TGTTCAGACA ATTAACTTTA TTAAAAGATG CTGGAATAGG GGGGGTGGAG
ATTAATCCAA TATCTTTTCC TAACAAAGCG GATGATATGG GCATCAAATC ACTACGTTGG
TTGAGTGACG AATGGATTGA TCTGGTTAAG GACACTTGTA ATGAAGCCAG ATCCAAAGAC
ATGACCTGTG ATTTGATCGT TGGTTCGGGT TGGCCGTTTG GCTCTGAAGA TTTAAAAGAG
GAAGAACGGG CAGAAGTAGT ATTGGTTTTT GCTGAAAAGG TTGAGGGACC GATGGTTTAC
GAAACAACAA AGTATAGCAT ATATAATGCC ATTGACCCTC AGGTTACTGA TAAAAATCCA
TTGCGATCAC CAATATTAAT GGACTTAAAG CTATCTCAAG ATCCAATAGC AGCAATTGCA
ACAACAATTG ATTTTTCGAA TCAAATTAAT AATGATATCA TAAAAATTGA TGTACCCGAA
GGAAAGCATT GCATCTATGC ATTAGTAAAA TTTAAGTCAT TCGCCAAGGT GATCAATGGT
GCACCAGGAG CTTCTGGCTC CATTTTAAAT CACTTAAATA AACAAGCTGT TGAAAGTTAT
TTAAATAGAA TGTCTTCCAC CATGCAAGAT CGGATAGGTC CGCTGTCTAA TTATTTAAGG
GCACTATTTA CGGATAGTAT GGAGTTGGAA GGTTGCAATT GGTGTGAAGA TTTTCCTGCA
GAATTCAAAA AACGATGCGG GTATGATCTC ATGCCTTATT TGCCTTTTAT CCTATTTAAA
GTGGGTCGTT TAGGAGCAGT AGTCGATGAG GATTATGGCG CAGAAAAATC TCAGGACCTA
AATGTGATAT TGAAAAAAGT AAGGTTCGAC TTTGAATATA CGAAAGCATT ATTACTAAGG
GAAAGATTTA CAGAAGTATA CCTGAAATGG TGTAAAGAGC TGAAGGTCAA ATCAAGGGCT
CAGGCCTATG GGCGTGGATT TTTTCCACTC GAAACAAGTT TAGGCTATGA TATCCCTGAA
GGGGAGTCCT GGACTACGAA TTACCTCAGA CATAAACTTG GTGAAGAGAT GTCGGACGAG
GATTACCGGA GGGGCAGGGG TTATACGATG ATCAATAAAT ACGTTTCTTC TGCAGCCCAT
TTAACCGGGA AACGCATTGT TAGCTGTGAA GAAATGACCA ATACCTATTT GGTTTTTAAT
GCAACACTGG AATTATTAAA ACTGGGATCA GACCAAAGCA TCATGTCTGG TATTACACAT
TCTGTCTGGC ATGGGTTTAA TTATTCGCCT AAAGAGGTTG CATTTCCAGG ATGGGTACAA
TATGGCTCTT ATTATAGTGA AAAGAATAAC TGGTGGCCAT ATTTTAAGTA CTTAAATGAT
TATAAGGCCA GATTGTCATC ACAGTTGCAA CATGGCGACT ACTATACTGA TATCGCTATT
TTACCAGCTA ATTATGATTT ATGGGCCAAT AACGGTGTAC AGACAGATCC ATTCCCTGAA
AAGTTAAATG TTCCTTATAC CTCTTTATTA TGGGAGGCAA TTAATAAAAA TGGTGGTGCT
GCAGACTATA TCACAGATAT GATATTGACG CAAAGTGAGA TCATAAAAGG GAAAATTGTT
TATGGTAAAA AATCTTTCGG GGTGCTATTT CTTCCAGGTG TAGAAAGTTT GAGTGAATTG
GCAATGCAAA AAATTGAACA ATTTGTAAAG ACAGGTGGCA AAGTGATCTG TATAGAGAAA
TACCCGGCAA AAGGACTTGG GTTTCTGAAT TGGGAACAAA AAGATGCAAC CATCAAGGAC
GCTGTAGCCC GGTTGAAACA ACAGTTTTCA GATCGATTTA TTTTTCTGGA CAAGCCCGCA
GACAATAAAT TTTTAGAGTG GTATACGCCG TTAATTGCAA CTCATCAGCT TCCTTCCTAT
TTAAATATTT CTACACCCAA TAGATATTTT ATGCAGATCC GTTCTGTGCG GGATGATGGA
ACTGAAATGT TTTTCTTTCA AAATGCACAT CGATATGATG CTTATCAGGC CAGGGTTGTC
TTTGATCGCA AAAAGATCAA AGGAAAATAC GCCTGGGTAT GGGATCTTGA TTCCGGTGAG
CGATTTAGAT TGACATTAAC CAATGATACC ACTTTTGAAT ATAACTTTGG ACCCACTGAA
TCTCTGTTAA TTATTTTTGA TCAAATCAAA AATGGGGAGA AGTGGAAGCC CTTGCTCAGT
TCGGGTAAGT CTACTCTAAA TCTGGACAAA GTTTGGGATT TGGAATTGAG GAATAGCTTA
GATGGTAGTG TAAAGCATGT TAATTTACCA CAAGTTATTG ATATGAAGGA TGATAAAGAG
CTGGTGAATT TCACTGGTAC CGCAATTTAT CGTAAAAAGA TCACACTGAC GGATACCAAA
AACTTAGTTA TTAATTTAGG TAAAGTTTAT GGAATTACAC AATTGTATAT CAACAAGGTA
CAAGTCGGTA TAAAATGGTA CGGGAAGAGA TTTTTTGATA TCTCTAAATA TGTCCAAACG
GGTACAAACG ATATTGAAAT TCATTTGGTT ACAACAATGG GCAATTATAT GAAAACTTTA
ACAGACAATG AAATCGCTCA ATATTGGGTA AACAGGAAAG GGAGAGAGCA GGAAATACAA
TCGATGGGAA TTGTAGGACC TATCGAAATT TATCAACAAA ATTAA
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| Protein sequence | MNRRTFIQNT SIATSSLVFF NQFESLAFSK SDQDLYTLFK NPPANYRPFV RWWWNGNKIQ
KKELFRQLTL LKDAGIGGVE INPISFPNKA DDMGIKSLRW LSDEWIDLVK DTCNEARSKD
MTCDLIVGSG WPFGSEDLKE EERAEVVLVF AEKVEGPMVY ETTKYSIYNA IDPQVTDKNP
LRSPILMDLK LSQDPIAAIA TTIDFSNQIN NDIIKIDVPE GKHCIYALVK FKSFAKVING
APGASGSILN HLNKQAVESY LNRMSSTMQD RIGPLSNYLR ALFTDSMELE GCNWCEDFPA
EFKKRCGYDL MPYLPFILFK VGRLGAVVDE DYGAEKSQDL NVILKKVRFD FEYTKALLLR
ERFTEVYLKW CKELKVKSRA QAYGRGFFPL ETSLGYDIPE GESWTTNYLR HKLGEEMSDE
DYRRGRGYTM INKYVSSAAH LTGKRIVSCE EMTNTYLVFN ATLELLKLGS DQSIMSGITH
SVWHGFNYSP KEVAFPGWVQ YGSYYSEKNN WWPYFKYLND YKARLSSQLQ HGDYYTDIAI
LPANYDLWAN NGVQTDPFPE KLNVPYTSLL WEAINKNGGA ADYITDMILT QSEIIKGKIV
YGKKSFGVLF LPGVESLSEL AMQKIEQFVK TGGKVICIEK YPAKGLGFLN WEQKDATIKD
AVARLKQQFS DRFIFLDKPA DNKFLEWYTP LIATHQLPSY LNISTPNRYF MQIRSVRDDG
TEMFFFQNAH RYDAYQARVV FDRKKIKGKY AWVWDLDSGE RFRLTLTNDT TFEYNFGPTE
SLLIIFDQIK NGEKWKPLLS SGKSTLNLDK VWDLELRNSL DGSVKHVNLP QVIDMKDDKE
LVNFTGTAIY RKKITLTDTK NLVINLGKVY GITQLYINKV QVGIKWYGKR FFDISKYVQT
GTNDIEIHLV TTMGNYMKTL TDNEIAQYWV NRKGREQEIQ SMGIVGPIEI YQQN
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