Gene Phep_1575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1575 
Symbol 
ID8252677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1860436 
End bp1862061 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content39% 
IMG OID644935229 
Producthypothetical protein 
Protein accessionYP_003091850 
Protein GI255531478 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.12374 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0694567 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTATA AAGTAGATAT GAAAAAGATA TTCGTAGTAT TAACAGTTTG CGCAATGATG 
TGCTCATGTA GCAAAAAATT GGATGTTGCG CCTCCAAATA ACATAACAGA TGAACAAATC
CAGGCACTAT TGGCTAAAGG TGATCCAGCT ACAATTCAGT TGATTCTGGG AAGTCTGGCT
AATAATATGC CTTTACTAAT AAATTCTGGA ACTACAGGTG GTTTTGGTTC AGATGATCGA
TATAATAATG TCCAGGGATT GATGGCGATG AGAAATCTGG AAAGCAATGA CATTGTATTT
GGCAATAGAC CTTTAACAAT TTTTGGAGGT GATGAATATA GGTTCTTAGA TTTTATTTCA
TCGGGAGTTG ATAAAAACTC ACCTTATTGG GGTTATTCAT GGAACCTCAT CACAGCCGCT
AATACATTGC TTAACTATTT AGATGACAAT ACGGTTGGTA GCAATGTGAA GTTACAGGAG
TACAAAGCCA GAGCTTTAAC CTTAAGAGCC TATGCTTATA ATTTTTTAAT GGAAAATTAT
CAGGATGCTT ATTTGCAGGG CGGAAAAAGT AAATTGGGTG TTCCGCTATA TGATTTTTAT
TCGCCAATAC AGGAAAGTAA AGCCAGGGCT ACTGCTGAGG AAACTTATGC CTTTATCAAA
AATGACCTGA ACAGAGCCTT TCAATTGTTT ACCAGTGCAG GAATAACCTA TACTACCGGG
GTACTTACAG ATTTCGATTT AGCGGTAGTT GGCTTTTTGC AAACTAAAGT AGCATTGCAT
ACAGGTGATT GGCCAACAGC GATTGCCAAA GCCAATGAAG TGCTCAGCAA ATATCCAACG
TTGATGACAG AATCTGTATA TGGAGGGAAA AATATTGGCA CACAGGTGGC TCCCGAAATC
AGACCTGACC AAAATGGTTT TCTAAATATT AACGTCAATC CTGAAGTTAT ATTTGGATTC
CCTGTTGGGC AAGCTGTAAA TGTTCATGTG GGCTGGATGA ATCCATTTGG AGAAGGAAAT
GGTGGTCTGG GTGAAGGCTA CCAGCGAATT GACAATAGGT TGTATGATAA GATAAGTGCT
AACGACTTCA GGAAAAGTGT CTTTGTAGAA GGTGCCTGGG GAAATTATGC TTATCCAACC
AGTGGAGCCG TTAGAAATAT CCCTTCTTAT ATCAATCTTA AATTTGCGGC AACGCATGGT
ATAGGTGGAG GTACTGATAA AAAACTGGTG AATACAGCAA TGACCTGTTA TTACATGCGG
GTTTCTGAAG TGTTGTTAAT GAAAGCAGAA GCGCAGGCAC AGGCATCAAC AGATCCAAGT
GCTGCAAAAG CAACATTGAA TACATTGCTG GCCGCCAGGA CAAAACAAGG ACAGACAGCT
TTAACTTGTG ATACTTATCC ATCTATGGCT GGGCTGACTG CTTTACAAAT GGTACAATTG
CAAACCCGGA TTGAACTTTG GGGAGAGGGT GGACGCGAAT TTTATAATAA TAAACGTTGG
AATATCCCTG TTGACAGGAC AAGTTCAACT AATCATGTGG ACAAAAGCAC TTATCCTGTA
GCTAAGATGA CTTTACAAAT ACCGCTTGAT GAAATGTTAT ACAATGGCAA GTCGGTTCAA
AATTAG
 
Protein sequence
MFYKVDMKKI FVVLTVCAMM CSCSKKLDVA PPNNITDEQI QALLAKGDPA TIQLILGSLA 
NNMPLLINSG TTGGFGSDDR YNNVQGLMAM RNLESNDIVF GNRPLTIFGG DEYRFLDFIS
SGVDKNSPYW GYSWNLITAA NTLLNYLDDN TVGSNVKLQE YKARALTLRA YAYNFLMENY
QDAYLQGGKS KLGVPLYDFY SPIQESKARA TAEETYAFIK NDLNRAFQLF TSAGITYTTG
VLTDFDLAVV GFLQTKVALH TGDWPTAIAK ANEVLSKYPT LMTESVYGGK NIGTQVAPEI
RPDQNGFLNI NVNPEVIFGF PVGQAVNVHV GWMNPFGEGN GGLGEGYQRI DNRLYDKISA
NDFRKSVFVE GAWGNYAYPT SGAVRNIPSY INLKFAATHG IGGGTDKKLV NTAMTCYYMR
VSEVLLMKAE AQAQASTDPS AAKATLNTLL AARTKQGQTA LTCDTYPSMA GLTALQMVQL
QTRIELWGEG GREFYNNKRW NIPVDRTSST NHVDKSTYPV AKMTLQIPLD EMLYNGKSVQ
N