| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1574 |
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| Symbol | |
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| ID | 8252676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1856969 |
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| End bp | 1860436 |
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| Gene Length | 3468 bp |
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| Protein Length | 1155 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644935228 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003091849 |
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| Protein GI | 255531477 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.923861 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0467053 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA AAATACCTAG TTTATTTTCT TTTTTAGCGA TTATATTATC GTTAATATGG
ACAACACAGA CATTCGGTCA AACAGCTAAG CGTGTAAAAG GTAAAGTTGT AGATGCCGTT
ACAGGATTGC CAATTTTAGG AGTATCTATT TCAGAATCGG CTAATAAAAA CAAAACTTCA
ACTGATAAGC TTGGGCAGTT TGAGATTATG AGTACGAATA ATTCCACTTT AACATTTAGT
TATATTGGAT TTATTGAGCA GCGGGTAAAA GTAGATGCTA ACTTTGATCC GACTATTCGG
CTACAGGAAC AAACTACCGG CTTAAATGAG GTTGTTGTTG TGGCGTATGG TACTGCTAAA
AAAAGAGATC TGACGGGTTC TATCTCAACA ATTGATTCCA AAGTGCTTGC TGTGCAATCG
AATTCCAGCG TGAGTAGAGC ATTAGAGGGC GCTGCTCCAG GAGTACAGGT TTCGGCAGTA
GATGGTCAGC CTGGTCTTGA TATGGGGATC AGAGTTAGAG GTTTGGGTTC TGCTTCACAA
AGTACATCAG ATGCATTGGT TGTTATTGAC GGTGTGCCTG CACAGAATGC AAATCCACTA
GCCACTATTA GTCCTAAAGA TATTGAAAGT ATAACAATTC TTAAAGACGC AGCTTCAACA
GCGTTGTATG GATCCAGAGG TGCAAATGGT GTCGTTTTGG TAACAACTAA AAAAGGAAAA
AACGGAGCAC CCAGGATTTC TTTTGAGGGT AAGTTCGGCG TTAATCAGGC TGGACCTTAT
CAATTTGATA AGATGGACAA TCCAAAAGAT ATTTATGAAT ATGCCTGGTT GTCAATCTAT
AACTCTGTAA GATATGGAGT TGCTGGTTCC GGAACTTCAA AAAACTACAC AACGAATGTT
CAGAATCCGA ACATGAGCCA TGATGCTGCC GCACAATTTG CCAGTGCTCA CTTATTTGAT
TATACAGGTT CAGCCACTAA TTTTCAAATG AACAATCTAG GTAACTGGAT GCTGTATGAT
GTTCCCGGGG CAACCTATAC CACAACGGGA TCAGGTGTTA ACTCCAGTAA AACGATGTCG
GGAGCTTATC TGGTTAATCC TGATGGCAAG TTAAATCCAA ACGCAAAATT ATTGTACAAT
GAAAACTATG ATCAATTTGT ATTAGAAGAC AGACTTCGTC AGGAATATAA TCTATCCGTT
TCTGGAGGAA CTGATAAAAT TGACTATTTC TTCTCTGGAG GATATTTGGA AGATCCTTCT
TATATAAGGG GCTCAACTTT TTCCCGCTAT AATGGAAGAG CAAATGTAAA TGCGCAGGTT
TTTGACTGGT TAAAAATGGG TACCAATGTA ATGTATGGTG TCCGCAATAC GCAATCGCCA
GCTACACGAT TCGGACGTAA TCCAGGAAGT GCAGTGTCAA ATGTTTTCAG GTATATCAAT
GGCCAAAATC AACTTATTCA GCTGTATGCC AGAGATAAAG ACGGCAATTA TATCTATGAG
AACGGCCAGA AAAAAGTCCA TGTTCTGGCA GGTGATACCT ATTCTCCATT GGGCTTAACT
ACTTCGGCAT TGTCCAATAC TAATCTTTTA ACTGTATTGG ATACGGATAC GGACAATAGA
GAGTCGGGCG ATTTAAATAC CAGGACTTAT ATTCAGGCTA AATTGTATAG TGATCTGACC
TTTACTTCTA ATTTCTCCTA TGATAAATTT AATGAGGTCC GTACGCGTTT CTGGAATAAC
GAGACCGGTC AGGCACAAGG TGTTGGTGCC TTTGGAAAAG TTTTCAGTAA TGTAGCTATC
TTGAATGCCC AACAATTGTT GAATTACAAT AAAACCATTG GCTTACATAC TATTGAAGGC
TTACTTGGAC ATGAGTATGA TTCATTCAAG TCTGAAGGAT TGAATTACAG ATCCTCTTAT
GAGCTGATTC CAGGCTTTAT AAGCTATGCA AATTTTGTTG GAAGATATGA TGGAGGAACT
TTCTCTAATC CGGGTGGAGC ACAGGATGTC CGTAACATGG AAAGTTATTT TGCAAGGGGT
AACTACAACT ATGACAATAA GTATTTTTTA CAAGGTTCAA TTCGCCGCGA TGGATCGTCT
AAATTTAAAT TACCGGAAAA TAGATGGGGA ACTTTTTGGT CAGTAGGTGC AGGATGGAGA
ATATCCAGCG AAAAGTTCAT GAAGAGCAGT TCAGATTGGT TGAATGACCT TAAGGTTCGT
GCAAGTTATG GTATCATCGG AAATCAAAAT GGTGTAGCTA ACTATTCCGG TTACCAAACC
TGGGGCTATT CTGCAGTTTA TGCATCAACC ACAGCGGGTA CTGGTATACC AGCAAGCTAT
AACCTTTCAA AAAACGGATA TGTTAATGAT CAATTGACAT GGGAAAATAT CAACACATTT
GATACCGGCC TTGAGTTCAG TTTGTTTGGT AGGTTGAGAG GTTCATTTGA CTATTACAAC
CGGTTAACAA CTAATGCAAT CTGGAGTCAG CCTATTCCGA TTTCAAAAGG TCAGACTTCG
ATTTTGACCA ATTCTGCCAA ACTAAGTAAT AAGGGCTTTG AAATTGATCT TTCGGTTGAT
ATCATCAAGA ATGATGACTG GAACTGGACT GTATCAACAA ATGGCACACA TTACAGAACT
ATATTAAAAG ATGTTCCAAA AGGAGTAGGA TCAGCTGAAC TTAATGGAAA CTGGACTTCA
GGTGTGGATG GCTGGGCGGC CGCTGGTACT GGTGCGGTTA CCCAAACGGT TTTTTTAAGA
GGAATAAATA AGGATTATTA CAATTTATAC CTGTTCAAAT ATGCTGGTGT TGACCAGGCT
ACTGGTTTGC CTTTGTTTGG GCATCAAGTG ACTCAAAAAG AGGCTGATGC AGGCCTTTAT
CCAACTTATA AAGTAGGTGA AAGCTTCAAT TCAACAGATT ACTCTATAGC GAGCAGGTAT
GAAATGGGCA GTGCTGTTCC TGATTGGATT GGCGGTTTTA GTACTTCGTT AAGGTATAAG
AACTTTGATT TCTATACTTC ATTGGCCTAC CAATTGGGAG GTAAGTTTTT CAGTACAGAA
TATGGAAACA ATATGTATGT TAGTGAGGGA GCTATACGAT CTGCAGAGTT AATAGGTAAT
ACCTGGACAC CGGAAAATAC AGGCGCTAAA TTTCCGATGG TGATGTATGG TAATACATAT
GGGAACGGAG CCACATTTGG AAGTTGGTTA TATTCAGATA TGGCTTTGTT CAACGCATCT
TATTTAAACC TGAAAAATAT TACAATTGGA TATACGCTTC CTGAGAAACT TTTAAAAAGA
ACTAAAATTA GTAAATTGAG AATTTTCGCT TCCGGAGATA ATTTATGGTT GTTGTCTTCC
CATTCAGGAA TAGATCCTAG AATGTCTCTG GTAGGAGGTT TTGAGGTGGC AGCCTATTCA
TATCCTTCAA TGAGAACGTT CACTTGTGGT TTTAATCTTG ATTTTTAA
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| Protein sequence | MKKKIPSLFS FLAIILSLIW TTQTFGQTAK RVKGKVVDAV TGLPILGVSI SESANKNKTS
TDKLGQFEIM STNNSTLTFS YIGFIEQRVK VDANFDPTIR LQEQTTGLNE VVVVAYGTAK
KRDLTGSIST IDSKVLAVQS NSSVSRALEG AAPGVQVSAV DGQPGLDMGI RVRGLGSASQ
STSDALVVID GVPAQNANPL ATISPKDIES ITILKDAAST ALYGSRGANG VVLVTTKKGK
NGAPRISFEG KFGVNQAGPY QFDKMDNPKD IYEYAWLSIY NSVRYGVAGS GTSKNYTTNV
QNPNMSHDAA AQFASAHLFD YTGSATNFQM NNLGNWMLYD VPGATYTTTG SGVNSSKTMS
GAYLVNPDGK LNPNAKLLYN ENYDQFVLED RLRQEYNLSV SGGTDKIDYF FSGGYLEDPS
YIRGSTFSRY NGRANVNAQV FDWLKMGTNV MYGVRNTQSP ATRFGRNPGS AVSNVFRYIN
GQNQLIQLYA RDKDGNYIYE NGQKKVHVLA GDTYSPLGLT TSALSNTNLL TVLDTDTDNR
ESGDLNTRTY IQAKLYSDLT FTSNFSYDKF NEVRTRFWNN ETGQAQGVGA FGKVFSNVAI
LNAQQLLNYN KTIGLHTIEG LLGHEYDSFK SEGLNYRSSY ELIPGFISYA NFVGRYDGGT
FSNPGGAQDV RNMESYFARG NYNYDNKYFL QGSIRRDGSS KFKLPENRWG TFWSVGAGWR
ISSEKFMKSS SDWLNDLKVR ASYGIIGNQN GVANYSGYQT WGYSAVYAST TAGTGIPASY
NLSKNGYVND QLTWENINTF DTGLEFSLFG RLRGSFDYYN RLTTNAIWSQ PIPISKGQTS
ILTNSAKLSN KGFEIDLSVD IIKNDDWNWT VSTNGTHYRT ILKDVPKGVG SAELNGNWTS
GVDGWAAAGT GAVTQTVFLR GINKDYYNLY LFKYAGVDQA TGLPLFGHQV TQKEADAGLY
PTYKVGESFN STDYSIASRY EMGSAVPDWI GGFSTSLRYK NFDFYTSLAY QLGGKFFSTE
YGNNMYVSEG AIRSAELIGN TWTPENTGAK FPMVMYGNTY GNGATFGSWL YSDMALFNAS
YLNLKNITIG YTLPEKLLKR TKISKLRIFA SGDNLWLLSS HSGIDPRMSL VGGFEVAAYS
YPSMRTFTCG FNLDF
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