Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1555 |
Symbol | |
ID | 8252657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 1841258 |
End bp | 1841728 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644935209 |
Product | regulatory protein AsnC/Lrp family |
Protein accession | YP_003091830 |
Protein GI | 255531458 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.469049 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACAG AACTAGATAA AACGGATTTT AAAATTCTTA AATTATTACA GGAAAATGGA AGGATGACAA ATTTACTATT GTCTCAGGAG ATCGGACTTT CTCCTGCACC TACATTAGAA CGTGTAAGAA AGCTTGAAGT ATCTGGTTTT ATTAAAAGCT ACCATGCCCT GGTTGATGAA GAAAAGCTGG GTTTGGGTAT AAAAACCTTT ATACAGGTAC AGCTCGATTT TCATAAGAAC AATACCATCC AGATTTTCCT GGATGAAGTG AACCAGATCA AAGAGATTAC AGAATGCCAC CACGTTACGG GACAGGCTGA TTTTCTTTTA AAGGTATATG TCAATGATAT TAAAGCTTAT GAGCGCCTGA TCATGGATAA GATCAGCAAA ATCTCAGTAG TAAAAACTTT TCAAACGATG ATGATCATGT CTACCACCAA GAAAGAACCC ATTGTTCCTT TGGAATATTA A
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Protein sequence | MATELDKTDF KILKLLQENG RMTNLLLSQE IGLSPAPTLE RVRKLEVSGF IKSYHALVDE EKLGLGIKTF IQVQLDFHKN NTIQIFLDEV NQIKEITECH HVTGQADFLL KVYVNDIKAY ERLIMDKISK ISVVKTFQTM MIMSTTKKEP IVPLEY
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