Gene Phep_1544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1544 
Symbol 
ID8252646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1829988 
End bp1830407 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content37% 
IMG OID644935198 
Productribonuclease P protein component 
Protein accessionYP_003091819 
Protein GI255531447 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0594] RNase P protein component 
TIGRFAM ID[TIGR00188] ribonuclease P protein component, eubacterial 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.290862 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACAT TTAAAAAAGA AGAACGGTTA TGTAGTAGGA AATCATTGGA TCTGCTATTT 
AAAAACGGTT CTTCTTTTTT ATTATACCCC TACCGCATCT CGTATTTATT TGTTTCCGAA
GCACAGCGCT TTCCGGTTCA GGTAGTAATC AATGTAGCTA AAAAAAGGTA CAAAAGGGCG
GTAGACAGGA ACCTGATCAA ACGTCGCATC CGCGAGGCCT ATCGTTTACA AAAAGAACAG
GAACTTTATA CTTTATTACC TGGTAACAAC CCTCTATTGT TGCTTTCAGT ACAGTTTGTG
GGTAAAAAGA TTTATGATTT TTCTTTTCTG GAAAAGAAAC TGAGTGCAGC ATTTAAGCGG
TTGACAGCAG ATTTGGAAGT TAAAAAGCCT AACACGGGGA AAAGTGATGA AGGTAATTAA
 
Protein sequence
MNTFKKEERL CSRKSLDLLF KNGSSFLLYP YRISYLFVSE AQRFPVQVVI NVAKKRYKRA 
VDRNLIKRRI REAYRLQKEQ ELYTLLPGNN PLLLLSVQFV GKKIYDFSFL EKKLSAAFKR
LTADLEVKKP NTGKSDEGN