| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1514 |
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| Symbol | |
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| ID | 8252615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1797205 |
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| End bp | 1798269 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644935168 |
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| Product | 3-dehydroquinate synthase |
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| Protein accession | YP_003091790 |
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| Protein GI | 255531418 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0337] 3-dehydroquinate synthetase |
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| TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.628425 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAT TGGAGAGCGC AGGTCATAGC ATTTATTTTG AAACAGAACT GGCACCTTTA
ATGAAGGTAA TTGAAGCAGA AAAATACAGT AAAATCTTTG TTTTTGCGGA TACACATACG
TCAGAACTGT GTTTACCATT GTTCAGGGAA ATGATGGACG ATTTTAATGG TTTTGACCTG
ATAGAAACTG ATCCTGGGGA AGAAAACAAG AATATTGATT TTTGCATCGG CATCTGGAAG
ACCTTACTTG ATTTTGGTGC CGACCGTAAA TGCCTGATGG TTAACCTGGG TGGTGGCGTA
ATTACCGATA TGGGAGGCTT TGTGGCCTCA ACCTATAAAA GAGGGATAGA CTTTATCAAT
ATCCCTACTA CCCTATTGTC GCAGGTAGAT GCTTCTGTTG GCGGTAAAAC CGGGATTGAT
GTAGATAATG TGAAGAACAT GGTGGGTACT TTTACCCTAC CGCAGTCGGT TTTTATTGAA
ACTAAATTTT TAAAAACCCT GCCACAACGG GAGCTGCTTT CCGGCTTTGC CGAAATGATC
AAACATGGTT TAATTGTAGA CCGTACCTAT TATAATGATT TGAAGAGTAG CAATTACCTC
CAGATTTCGG CTCAGGCCAT TTACCGTTCT GTAGAGATCA AGAATGAAGT AGTTACGGAA
GATCCACATG AAAAAGGACT AAGAAAGATC CTGAATTACG GACATACCAT CGGACATGCA
GTTGAAACCT ATTCCCTGAT CAACGATACC CAGCCACTTA CACATGGCGA GGCCATTGCT
GTGGGTATGA TCTGTGAGGC TTTCCTTTCT TCAAACAACA ATACCTTATC AGCTGATGAT
TTAAAAGACA TTACTGATTA TATCAGTACG CTTTATCCGG CTTACAGGAT TAAAGAAGAC
AGTTTTAAGC AATTGCTGGA GTTTATGCAA AGTGACAAGA AAAACGAGAA CGGACAGATC
ATGTTCTCTT TGCTCAGTAC GATTGGCAAA TGCGATTACA ATTGCAGGGT ATCGGAAAAA
GACATTCTGG AAAGCTTTGC TTACTTTAAC CGCATTTATA GTTAA
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| Protein sequence | MKKLESAGHS IYFETELAPL MKVIEAEKYS KIFVFADTHT SELCLPLFRE MMDDFNGFDL
IETDPGEENK NIDFCIGIWK TLLDFGADRK CLMVNLGGGV ITDMGGFVAS TYKRGIDFIN
IPTTLLSQVD ASVGGKTGID VDNVKNMVGT FTLPQSVFIE TKFLKTLPQR ELLSGFAEMI
KHGLIVDRTY YNDLKSSNYL QISAQAIYRS VEIKNEVVTE DPHEKGLRKI LNYGHTIGHA
VETYSLINDT QPLTHGEAIA VGMICEAFLS SNNNTLSADD LKDITDYIST LYPAYRIKED
SFKQLLEFMQ SDKKNENGQI MFSLLSTIGK CDYNCRVSEK DILESFAYFN RIYS
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