Gene Phep_1504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1504 
Symbol 
ID8252605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1785261 
End bp1786349 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content45% 
IMG OID644935158 
Producthypothetical protein 
Protein accessionYP_003091780 
Protein GI255531408 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.232931 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.12901 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCC AGATATACCC GATACTCGTC CTGTTCAGCT TAGCTGCGGT CAGCTCGGTT 
TCCGCACAGA AAAAGGCAGC AAAAGCAGCC TATATATATA CCGATGCACA AACACTCACA
AAAAACGGGC AATGGCCTTT AAATACCAGT GATTATCAGC GGGTGGATAG TACTGGCCGG
GTGCCCCTGC CTGCAACAGT GCAAGCCCTG GCGCACTGGT CGTCGGGCAT AAATATTATG
TTTCAGACCG ATTCGAAAAG CATTGCTGTA AAGTGGAAAA TTGCCAAATA CAGGACGATA
CCTACCATGA CCGCTGTGTC ATCGTGTGGG CTGGACCTAT ATGGCTGGAA TGGTACCTAT
TGGCAACACG TAGGAATCGG AATCCCCAGG TCGGAAGTTA ATACCGATGT GATTGTAAAA
GCAATGGCCG GAAAGATGAC CCATTACAGG CTATACTTGC CCATAGGATC GGAGCCCACC
CAGGTGGAAA TTGGTATTGA TCCTTTGGCT ACCATCAAGC CTGCCGATGC GCGTTTCGTA
CCCAAAAAGC GGGTAGTTAT TTATGGATCG AGCATCACAC AGGGCACAGC TGCTTCTCGT
CCGGGTATGA CCTATACTTC AATTTTATCG AGAAGATTAG GGGTGGAGAC TATTAATTTA
GGCTTTAATG GTAGTGGTAA AATAGAAATT GAACTGGCCG AGGCAGTGGC CAGGATTCCG
GCGGATGTGT ATGTGCTGGA TTGTGTGCCG AATCCTAGCC CTCAGGAAAT AAAAGAAAGA
ACTTATCCAT TTGTAAAAAA ACTACGCACA TTGAGACCCA ATACGCCCAT TGTGATGATT
GAAAGCATTA CCCGTGAAAG GACTTTCTGG GATTTGGAGT CGCAGGCGAA GGTAAAACAA
CAGAATGTGG AATTTAAGAC TGCTTATAAA AAGCTGCTTA AAGATGGAGA GAAACAGTTA
TATTATTTAT CCACTGAAAC TTTGAACGGG GACGACCATG AATCGTCTGT TGATGGGACC
CATCTTACTG ACCTTGGTTT TATGCGGCTG GCTGAAACAG TGGCGAAGAC ATTAAAAACA
ATTTTATAA
 
Protein sequence
MKIQIYPILV LFSLAAVSSV SAQKKAAKAA YIYTDAQTLT KNGQWPLNTS DYQRVDSTGR 
VPLPATVQAL AHWSSGINIM FQTDSKSIAV KWKIAKYRTI PTMTAVSSCG LDLYGWNGTY
WQHVGIGIPR SEVNTDVIVK AMAGKMTHYR LYLPIGSEPT QVEIGIDPLA TIKPADARFV
PKKRVVIYGS SITQGTAASR PGMTYTSILS RRLGVETINL GFNGSGKIEI ELAEAVARIP
ADVYVLDCVP NPSPQEIKER TYPFVKKLRT LRPNTPIVMI ESITRERTFW DLESQAKVKQ
QNVEFKTAYK KLLKDGEKQL YYLSTETLNG DDHESSVDGT HLTDLGFMRL AETVAKTLKT
IL