Gene Phep_1487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1487 
Symbol 
ID8252588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1767456 
End bp1767944 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content39% 
IMG OID644935141 
Producthypothetical protein 
Protein accessionYP_003091763 
Protein GI255531391 
COG category[S] Function unknown 
COG ID[COG4430] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.702863 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.552132 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGTC ATTCCTTCCA GGCATCCCTG GAAATAATAG GTATTAATCC CTACGTTCAG 
GTTCCGGAAG TTATTCTGGC CGAAATTTTT ACTCAGGCAG GTAAAAACAA GAGCCATATT
CCGGTTGCGG GAACTGTAAA CGGCTTACCG TACCAGCAAA CTTTACTTAA GTACAGTGGT
TTTTGGCGAC TCTATATCAA TACGAAAATG CTTAAAGACT CTCCCAAACT AATCGGGGAA
ACCATTAAAG TGACCATTAA ATTTGACCCG TCCGATCGGA CAATTAAGCC CCATCCCGAG
CTATTAAAGG CATTAAAAAA GAGTCCAGAG GCCAAATCCA AATTTGATCT TCTTAGCCCT
TCTATGCAAA AAGAGATAAT AAGATACATT TCTGGCTTAA AAACAGAAGA AAGCAGGAAC
CGGAATATTG ATAAAGCGAT TAACTTTTTG TTAGGTAAAG GTGCCTTTAT AGGAAGAAAA
ATGCTCTAA
 
Protein sequence
MKSHSFQASL EIIGINPYVQ VPEVILAEIF TQAGKNKSHI PVAGTVNGLP YQQTLLKYSG 
FWRLYINTKM LKDSPKLIGE TIKVTIKFDP SDRTIKPHPE LLKALKKSPE AKSKFDLLSP
SMQKEIIRYI SGLKTEESRN RNIDKAINFL LGKGAFIGRK ML