| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1476 |
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| Symbol | |
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| ID | 8252577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1750922 |
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| End bp | 1752022 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644935130 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003091752 |
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| Protein GI | 255531380 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.142053 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.195363 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAT TATTATATAC AATTACACTG GCACTTCTTT TTGCTTCCTG CTCATCAGAT
AAGCCAAAAG ATAAAAAGGG GGAGCTTGAA CAGCTTAAAA AACAGCGCAC TGAACTGAAC
GGGAAAATAG AGAAGCTGGA AGCAGAACTG GGGCAGAATA AAACCAAAAC CGACCTTAAG
GATGTAGTGG TTTCGGAACT TGCAGAAACA CAATTCAGGA ATTATGTAGA GGTGCAGGGA
AAAGTGGATG CGGAAGACAA TGTAGAGGTG ATGCCGGAAT CGCCGGGAAC CGTGACTGCC
ATTTATGTAA AAGTAGGGCA AAACGTAAGC AAGGGCCAGG TACTGGCCCA GCTGGACGAT
AAGGTACTGC GCCAAAGTGT TGCTCAACTG CAAACCCAGC TGGATCTGGC CAGTACAGTG
TTCAATCGCC AGAAGAACCT ATGGGACCAG AAAATCGGCA CAGAGGTTCA GTACCTGACC
GCTAAAAGCC AGAAGGAAGG GCTGGAAAAA CAACTGGCCG GACTGAAATC ACAGGCTGCT
ATGAATAAGG TTAAAAGCCC TGTTTCCGGT ACAATAGATG CAATGGAGCT GAAGCTTGGC
CAATCTGTTG CGCCTGGCAG CCCAACAGGC ATCAGGGTAG TCAATGCCAG CAGGCTTAAG
GTTAAGGCAC TGGTTTCGGA AAACTATGGC GGAAAGGTAA ACCAGGGCGA TGAGGTTACA
GTTTCTTTAC CTGATGTGCC AGCTAACCTG AATGCCCATA TTTCTTTTGC TGCAAAGGTC
ATTGACCCGG TTTCCAGAGG TTTCAATGTA GAAGTGAAGC TGCCTTCAGA TAAGAGGTAC
CGACCAAATA TGGTGGCTGT ATTAAAAATT ATAGACTACA GAAACGATAG AGCCCTGGTG
GTTCCTGTAA ATGCCGTACA GAAATCTGAA ACCAGTGAAT ATGTTTTCAC AGCTGTAAAT
GGCAAAGCTA AAAAAGTAGA GGTGAAAACA GGGAAGATCT CGGATGGTAA AGCCGAAGTG
CTGTCGGGCC TGAAAGCGGG CGACAAAGTG ATCACTACCG GATTTCAGGA ACTGAATGAC
GGGGACAATG TAAAGTTATA A
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| Protein sequence | MKTLLYTITL ALLFASCSSD KPKDKKGELE QLKKQRTELN GKIEKLEAEL GQNKTKTDLK
DVVVSELAET QFRNYVEVQG KVDAEDNVEV MPESPGTVTA IYVKVGQNVS KGQVLAQLDD
KVLRQSVAQL QTQLDLASTV FNRQKNLWDQ KIGTEVQYLT AKSQKEGLEK QLAGLKSQAA
MNKVKSPVSG TIDAMELKLG QSVAPGSPTG IRVVNASRLK VKALVSENYG GKVNQGDEVT
VSLPDVPANL NAHISFAAKV IDPVSRGFNV EVKLPSDKRY RPNMVAVLKI IDYRNDRALV
VPVNAVQKSE TSEYVFTAVN GKAKKVEVKT GKISDGKAEV LSGLKAGDKV ITTGFQELND
GDNVKL
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