Gene Phep_1467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1467 
Symbol 
ID8252568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1740770 
End bp1741309 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content42% 
IMG OID644935121 
Producthypothetical protein 
Protein accessionYP_003091743 
Protein GI255531371 
COG category[L] Replication, recombination and repair 
COG ID[COG0742] N6-adenine-specific methylase 
TIGRFAM ID[TIGR00095] RNA methyltransferase, RsmD family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.690452 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATAA TAGGAGGAAG ATTAAAAGGC ATCCGTTTCA ATGCCCCCGA AAGTTTGCCC 
GTAAGGCCCA CTACAGATAT GGCCAAAGAA GCCCTGTTCA ATATTCTATA CAACACTTAC
GATTTTGAGA ACTGCAATGT GCTCGACCTG TTTTGCGGAA CAGGCAATAT CAGTATAGAG
TTTGCCTCGA GGGGGATAAA ACAGGTTACT GCGGTAGATA AGCATTCGGG ATGTGTGTAT
TGGGTAAAAT CTATTATAGA AAAACATAAG CTACAGGAAA TAGAGGTACA AAAAGCAGAT
GTTTTTAAAT TTCTTGAACA GCCACAGCAG GCTTACCAGA TCATCTTTGC AGATCCTCCT
TACAACATCC CGGGCATTCC GTTAATTCCC GGGCTGGTAA TGAAAAACAA CCTGCTTACC
GACAATGGGT TGTTAATTGT AGAACACCCC TCTTTGCTAA AACTCAATGA CCAGCCAGGC
TATACAGAAA CCCGGCGTTA CGGCAATTCC TCATTTAGTT TTTTTGAAAA AACGCATTAA
 
Protein sequence
MRIIGGRLKG IRFNAPESLP VRPTTDMAKE ALFNILYNTY DFENCNVLDL FCGTGNISIE 
FASRGIKQVT AVDKHSGCVY WVKSIIEKHK LQEIEVQKAD VFKFLEQPQQ AYQIIFADPP
YNIPGIPLIP GLVMKNNLLT DNGLLIVEHP SLLKLNDQPG YTETRRYGNS SFSFFEKTH