Gene Phep_1465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1465 
Symbol 
ID8252566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1739679 
End bp1740302 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content41% 
IMG OID644935119 
ProductNUDIX hydrolase 
Protein accessionYP_003091741 
Protein GI255531369 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.650531 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT ATAGGATTTA CATTAACGAC AACACTTTAT ATATTACTGC AACTGCACCC 
GAACTGATTA CTGAGATTGA ACCGCTGGAG GTTGAGGGTT TTTATTTTCC CTCCTTTTAT
AAAAGGTTAA GTACGGTATC GGGCAAATCC TATTTATTGA TAGATAAGGA CCCGCAGGCA
TTGTTTAAGA GCATAAAAAA AAGCTGCACG ATCATTAAAG CAGCTGGTGG ACTGGTAGCC
AGTGCCAAAG GCAGGCATCT CTTTATTTTC AGGAATAAAA GATGGGACCT GCCCAAGGGA
AAAGTAGAGA AGGGCGAGAA AATGAAGGAA GCGGCCTTAA GAGAAGTGGA GGAGGAATGC
GGGGTGAAAA TTTATACCAA TGGGGATAAG CTCTGTAAAA CTTATCATGT ATATACCCTG
GGCACTAAAA TAGTACTTAA AAAGACGAAC TGGTATAGTA TGACCGTTAA GGGCGAACCT
AAACTGATCC CCCAAAAAGA AGAGGGCATT ACAAAGGCCA GCTGGCTGGG CAAAGATGAG
CTTAAGCCTA TAATAGCAAA TACTTATCCG TCTATTATGG ACGTACTGGA AGCCGGTGAG
CTTTTAGAAC AGCGTGTTTT ATAA
 
Protein sequence
MKKYRIYIND NTLYITATAP ELITEIEPLE VEGFYFPSFY KRLSTVSGKS YLLIDKDPQA 
LFKSIKKSCT IIKAAGGLVA SAKGRHLFIF RNKRWDLPKG KVEKGEKMKE AALREVEEEC
GVKIYTNGDK LCKTYHVYTL GTKIVLKKTN WYSMTVKGEP KLIPQKEEGI TKASWLGKDE
LKPIIANTYP SIMDVLEAGE LLEQRVL