| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1455 |
|---|
| Symbol | |
|---|
| ID | 8252556 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 1726745 |
|---|
| End bp | 1729024 |
|---|
| Gene Length | 2280 bp |
|---|
| Protein Length | 759 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644935109 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_003091731 |
|---|
| Protein GI | 255531359 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.402299 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.663839 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCG CTTATATATC TACTTATCCG CCACGCGAAT GTGGCATTGC TACGTTTAAC
CACAACCTGC TCAGGGCCAT TGGTTATGAT AAGACTGCCG TTTCTGAGGA CAGTTACGTG
GTGGCCATGA ATGATTCCGA GAATTTGGAC CAGTATGAAT ACCCCAGGGA AGTAAAGTAC
CAGATCAGGC AGGAAAATCA AAAAGATTAT ATCAGGGCAG CTGATTATAT CAATACAAGT
TTAGTGGATG CCTGTATTAT GGAGCATGAA TTTGGCATTT ACGGTGGTGA AAACGGGGTT
TATATCCTTC CACTCATTGC AAGACTGCAA AAACCACTGG TTACCATTTT GCATACCATA
TTAAAAGACC CGAGCTATAT GCAGCTCACC ATTATCAGGG AAATCGCCAA ACATTCTTCC
CGGATAGTTG TGATGAGCCA TAGGGCAGTT GGTTTTTTAA CCAGTATATA TGGCATCCCT
TTTAGTAAGA TACAGCTGAT AGAACATGGT GTACCTGACC TGGAGGCAAA AACGGATAAT
CCTGTAAAAC TGTCCCTGCC CTTTAAAAAT AAAAAAGTAT TGTTCACTTT TGGTCTGATC
AGCAGGAATA AGGGCCTGGA AACCGTAATT GAGGCCTTAC CACAAATAGT GGCCAAAAAT
CCCGACGTCA TGTATGTGGT ACTGGGCACT ACACATCCTG GCGTAATCAG GAATTCAGGA
GAGGAATATC GCGACAGCCT TAAAAAACTG GCCAGAAAGC TCAATGTGGA AGACAACCTT
ACTTTTATCA ACAAGTTTGT ATCGGAAGAG CAGTTGTTTG AGTATTTAAC TGCCTGTGAT
ATGTACATTA CCCCCTATTT AAATGAGGCC CAGATTACCA GCGGCACACT TTCTTATGCG
GTTGGTGCAG GAGCTGCAGT AATTTCTACC CCTTACTGGC ATGCCCAGGA ATTACTGGCA
GATAACAGGG GACGTTTATT CGATTTTAAA GATGCGGATG CGCTGGCAGC TATTGTAAAT
GAGCTGTTTG AAGACGAGGA AAAATTAAAC CAGCTGAAAG CAAATGCCTA TGAATACGGA
CTTCATTTGC GCTGGCCAAG TACAGGACAG GTATTTGTGG ACGTACTGGA AGAGGCCATC
TCTAAATCGC TGGCCGAAAA AGACAATACC GGTAAACAGA TTATAGATCC TGATGCGATG
CCCTCCTTCA GTCTGGCCCA CATTCAGCGA CTCACAGACG ATACTGGTAT TGTACAGCAT
GCTAAATATG GGATTCCTAA CCTCAAAGAG GGCTATTGCC TGGACGACAA TGCCAGGGCT
TTAATAATGG CCATTTTAGC TTATCAGCAA AATAAGAGCA AAGTAGCCTT AGAACTGTTA
CCGGTTTATT TAAGCTATAT CCAGTACATG CAACGTGATG ATGGCAATTT CAGGAATTTT
TTGAGCTTTA CACGTGATTA CCTGGACGAA ATTGGCTCTG AAGATTCCTT TGGCCGCACC
ATTTGGGCGC TGGGGTACCT GATCCATAAT GCCCCGAACA ATTCTTACAG GGAATTTGCA
AGAGAGCTTT TCAATAAATC TGTCCCCCAT TTTAAAAACC TGGGCCATTT AAGGGGCATA
GGAAATACCA TGATCGGCCT GTCAAATTAC TTGAAAGCAC ATCCCGGCGA TGAACACATC
AGGGAGCAGT TTGATTTACT GGCTGAACCT CTGAAAGCTG CTTACAGGGA GAATAAAAAG
GGGCACTGGC ATTGGTTTGA GGACAAGATG ACCTACGACA ATGCAATTTT ACCCCTGGCA
CTGTTGTCTT ATTACCAGAC CACTAAAGAT AAAGAAGCCC TGGACATCGC TCTGGAAAGT
ATGGAATACC TGAGCCAGAA GACCCTGATA TATGGTTATT TAAACCCGGT GGGCAATGAT
GGCTGGCTGT ATAGGGAAGG CAATTCAATG GCCTTATATG ATCAGCAGGC AATTGAAACC
ATGGCCATGG TACTGATGTA TTTTAAAGCT TATGAAATTA CGCACGACCT GACCTATATT
AAACAGATGT ACCTCTGTTA CCAGTGGTTT CTGGGCGAAA ACAGTTTACA CCTTCCTTTA
TTTGACCATG AAACAAAGGG TTGTGGCGAT GGCCTTCAAC CACATGGTGT AAACCGCAAT
CAGGGTGCAG AAAGTACACT GGCTTATTGG ATTTCGCATC TGGTAGTATT GAAAGCGCTT
GAATATGAAT ACATTCAGAG CAGCGACCTG ACAACGGTAC AAAAACAGAT ACTCAGCTAA
|
|---|
| Protein sequence | MKIAYISTYP PRECGIATFN HNLLRAIGYD KTAVSEDSYV VAMNDSENLD QYEYPREVKY
QIRQENQKDY IRAADYINTS LVDACIMEHE FGIYGGENGV YILPLIARLQ KPLVTILHTI
LKDPSYMQLT IIREIAKHSS RIVVMSHRAV GFLTSIYGIP FSKIQLIEHG VPDLEAKTDN
PVKLSLPFKN KKVLFTFGLI SRNKGLETVI EALPQIVAKN PDVMYVVLGT THPGVIRNSG
EEYRDSLKKL ARKLNVEDNL TFINKFVSEE QLFEYLTACD MYITPYLNEA QITSGTLSYA
VGAGAAVIST PYWHAQELLA DNRGRLFDFK DADALAAIVN ELFEDEEKLN QLKANAYEYG
LHLRWPSTGQ VFVDVLEEAI SKSLAEKDNT GKQIIDPDAM PSFSLAHIQR LTDDTGIVQH
AKYGIPNLKE GYCLDDNARA LIMAILAYQQ NKSKVALELL PVYLSYIQYM QRDDGNFRNF
LSFTRDYLDE IGSEDSFGRT IWALGYLIHN APNNSYREFA RELFNKSVPH FKNLGHLRGI
GNTMIGLSNY LKAHPGDEHI REQFDLLAEP LKAAYRENKK GHWHWFEDKM TYDNAILPLA
LLSYYQTTKD KEALDIALES MEYLSQKTLI YGYLNPVGND GWLYREGNSM ALYDQQAIET
MAMVLMYFKA YEITHDLTYI KQMYLCYQWF LGENSLHLPL FDHETKGCGD GLQPHGVNRN
QGAESTLAYW ISHLVVLKAL EYEYIQSSDL TTVQKQILS
|
|---|
| |