| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1442 |
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| Symbol | |
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| ID | 8252543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1713638 |
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| End bp | 1714735 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644935096 |
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| Product | Mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_003091718 |
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| Protein GI | 255531346 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | [TIGR01928] o-succinylbenzoic acid (OSB) synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATTA CCCATACCGA AATTTACCGT TTCAGCATTC CTATGGAACC ATTTGTGATT
GCTACGGGCA CCATGCACTT TGCGCAGAAC GTGCTGATCA GGATCTACAC CGATGCAGGA
ATATATGGTG TTGGCGAATG CTCTGCCTTC CCTATGATTG TTGGCGAAAC ACAGGAAACC
TGTCTGGCCA TGGCGCAGGA TTTTGCAAAG ATCCTTATTG GTAAAGATCC CCTGGATATT
CCTGAACGGA TGAACGACCT GCTGGGCTAT GCGGCACACA ACAGCACCAT TAAAAGTGCC
TTTGACATGG CTTTGTTTGA TATTGCGGCA AAAAATGCCA ACCTGCCGCT GTACCAGTTT
TTAGGGGGAC AAAAACGAAG TATCGAAACC GATATGACCA TTGGCATTGA TACGCCTGAA
AATATGGCAC TTTCGGCGCT CAAATATCAG CACCAGGGCT GCCGGATCAT CAAAATAAAG
CTGGGCAAAA AAATCCATGA CGACATTGAA CGTGTAAAAC AGATCAGAAA GGCAGTTGGC
GATGATATGG TGCTGCGCCT TGATGCCAAC CAGGGATGGA GTTTTGATGA TGCACTTTTT
GCACTGGGAG AACTTGCTCC CTTAAACATC GAATTTTGTG AACAACCCAT GCGTACCTGG
TACGATGATA AACTGCCCGA ACTGAGCCTG AACTCGCCCA TTAAAATTAT GGCCGATGAA
AGCTGCTATA ACCACCACGA TGCCCGAAAA CTCATCAACA GCCAGTCCTG TGAATACCTG
AACATCAAAT TTTCTAAATC AGGTGGCATT TTAGAAGCGC AAAAAATCCA TGAAACGGCC
CTGCAGGCAG GCGTTAAATG TATGATTGGC AGTATGCTGG AAAGCAGGAT TGCCTTGAGC
GCCAATCTGC ATTTTGCTTT AGCGAGTCCC AATGTGGTGT TTTTTGACCT GGATACCTGT
TTACTGGGGC ACCTGGTAGA TCCGGTTCTG GGGGGGCTGA CTTATGATGG CTACTTCCTG
GATGTACCCG ATACACCTGG TATAGGTGCA GATGCCGATC CGCATTTTTT GGTGGGATGT
GAGCAATGGC TAATATGA
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| Protein sequence | MKITHTEIYR FSIPMEPFVI ATGTMHFAQN VLIRIYTDAG IYGVGECSAF PMIVGETQET
CLAMAQDFAK ILIGKDPLDI PERMNDLLGY AAHNSTIKSA FDMALFDIAA KNANLPLYQF
LGGQKRSIET DMTIGIDTPE NMALSALKYQ HQGCRIIKIK LGKKIHDDIE RVKQIRKAVG
DDMVLRLDAN QGWSFDDALF ALGELAPLNI EFCEQPMRTW YDDKLPELSL NSPIKIMADE
SCYNHHDARK LINSQSCEYL NIKFSKSGGI LEAQKIHETA LQAGVKCMIG SMLESRIALS
ANLHFALASP NVVFFDLDTC LLGHLVDPVL GGLTYDGYFL DVPDTPGIGA DADPHFLVGC
EQWLI
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