| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1438 |
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| Symbol | |
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| ID | 8252538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1709261 |
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| End bp | 1710631 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644935091 |
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| Product | peptidase M20 |
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| Protein accession | YP_003091714 |
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| Protein GI | 255531342 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0996649 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGAGA TCAAAAAATA TGTTGAAGAA AACAAGCAGC GTTTTTTAGA CGAGCTGTTT
GAATTGCTGC GTTTTCCATC CGTTAGCGCC GACCCAAAAT ATAAAGGCGA TGTACTTAAA
ACTGCTGATT TTGTAGCGCA AAAGCTGAAA GATGCCGGTG CAGATAAAGT AGAGCTTTGT
GAAACCGCAG GTTACCCCAT TGTTTACGGC GAAAAGATCA TTGATGAACA ACTGCCCACA
GTTTTAATTT ACGGTCATTA TGATGTGCAA CCGGCCGATC CGCTGGAATT ATGGAAAACC
CCTCCCTTTG AGCCTACTGT ACGCGACGGC AAGATCTATG CACGTGGCGC ATGCGATGAT
AAGGGACAGT TTTACATGCA TGTAAAGGCC TTTGAGCTGA TGATGAAAAC CAATACCCTA
AGCTGCAATG TGAAGTTCAT GATTGAAGGC GAGGAAGAGG TAGGTTCAGC AAACCTGGGC
ACTTTTGTCA ATGCAAATGT AGAACGCCTT AAGGCCGACG TGGTTTTAAT TTCTGATACC
TCCATGATCA GCATGGAAAA CCCTTCAATT GAAACCGGAC TGCGTGGCCT GGCTTATATG
GAAGTTGAAG TTATAGGCCC TAACCGCGAT TTACACTCCG GTGTATATGG TGGTGCAGTG
GCCAATCCGG CAACGGTGCT TTGCAAAATG ATCGCTTCCT TACATGATGA AAACAACCAT
ATCGCCATTC CCGGATTTTA TGATAAAGTA CTGGAACTGA CAGCTGAAGA GAAAAAGGCA
TTAAATTCGG CCCCATTTGA TTTAAATGAA TATAAGGAAG ACCTGGATAT CAGGTCTGAA
TGGGGAGAAA AAGGTTATTC TACCTTAGAG CGTACCGGAA CCCGGCCAAC CTTAGAGGTG
AATGGCATCT GGAGCGGTTA TACTGGTGAA GGGGCCAAAA CGGTACTCCC TTCCAAAGCC
AATGCTAAAA TTTCTATGCG CCTGGTACCC AACCAAAGTT CTGAAGAGAT CTCTGCCATC
TTTACCAGGC ATTTTGAAAG CATAGCCCCC GATTATGTAA AGGTAAAAGT TACCACCCAC
CATGGAGGGG AGCCGGTAGT TACGCCTACA GACAGTGTAG CCTACCGTGC AGCAGAAAAA
GCCATTGTAG ATTCATTTGG TAAAGCACCA ATTCCTACCC GTGGGGGTGG AAGTATCCCT
ATTGTGGCCT TGTTTGAAAG CGCTTTGGGT ATTAAATCTG TGCTTTTTGG TTTTGGTCTG
GATAGTGATG CACTTCACTC GCCAAATGAG AAATACGATA TTTTTAACTA CTATAAAGGA
ATAGAGACTT TGCCTTTGTT CCATAAGTAT TTTGCTGAAT TGAGTAAGTA G
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| Protein sequence | MQEIKKYVEE NKQRFLDELF ELLRFPSVSA DPKYKGDVLK TADFVAQKLK DAGADKVELC
ETAGYPIVYG EKIIDEQLPT VLIYGHYDVQ PADPLELWKT PPFEPTVRDG KIYARGACDD
KGQFYMHVKA FELMMKTNTL SCNVKFMIEG EEEVGSANLG TFVNANVERL KADVVLISDT
SMISMENPSI ETGLRGLAYM EVEVIGPNRD LHSGVYGGAV ANPATVLCKM IASLHDENNH
IAIPGFYDKV LELTAEEKKA LNSAPFDLNE YKEDLDIRSE WGEKGYSTLE RTGTRPTLEV
NGIWSGYTGE GAKTVLPSKA NAKISMRLVP NQSSEEISAI FTRHFESIAP DYVKVKVTTH
HGGEPVVTPT DSVAYRAAEK AIVDSFGKAP IPTRGGGSIP IVALFESALG IKSVLFGFGL
DSDALHSPNE KYDIFNYYKG IETLPLFHKY FAELSK
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