Gene Phep_1411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1411 
Symbol 
ID8252511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1677279 
End bp1678019 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content38% 
IMG OID644935064 
ProductMethyltransferase type 11 
Protein accessionYP_003091687 
Protein GI255531315 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.110905 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAACTA TGCAGCGCAA ATGGTTTCAA TACTGGTTTA ACTCTCCTTA TTATCATATT 
CTTTACAGTC AACGTAATGA TGCTGAGGCA GAATTCTTAA TTGACAACCT TTCTGCCTAT
TTAAAACCAG CAGCCGAATC ACGCATACTG GACATAGCCT GCGGACGTGG CCGGCATGCC
ATTTACCTCA ATAAAAAAGG CTACGATGTA ACCGGAATAG ACCTTTCAGA ACAAAGCATC
AGATATGCAC AGCAGTTTGA GCAAAAACAC CTGCACTTTT TTGTGCACGA CATGCGCAAA
CTGTGTTTCA TCAATTACTT TGACATCGCT TTAAACCTGT TCACCAGTTT TGGATATTTT
GAAACTGAAA AAGACCATGT AAATGCTTTA AAGTCGTTCA GAAAGGGTTT AAAAGCTGAT
GGAACCCTGG TAATAGATTA TTTTAATACT GAAAAGATCA TCAAGAACCT TACCCATAAA
GAAATCAAAA CTGTTGAGGG GATAGAATTC CATTTGAGTA AATTTGTGGC CAATGGTAAG
ATCATCAAGC ACATCAATTT TGAACACCGC GGTAAGCCCT TTGCCTTTGA AGAAAGGGTA
CAGGCTTTTA AGCTGGCAGA CTTTGAACGG ATGTTTCAAA AAGCAGGATT AAGCATCAGT
GCCAAATTTG GAAGCTATGG TTTAGAGGAA TTTGATGAAA ATAAATCGGA CCGTTTGATA
TTAATCTGCA AAAAAGCATG A
 
Protein sequence
MLTMQRKWFQ YWFNSPYYHI LYSQRNDAEA EFLIDNLSAY LKPAAESRIL DIACGRGRHA 
IYLNKKGYDV TGIDLSEQSI RYAQQFEQKH LHFFVHDMRK LCFINYFDIA LNLFTSFGYF
ETEKDHVNAL KSFRKGLKAD GTLVIDYFNT EKIIKNLTHK EIKTVEGIEF HLSKFVANGK
IIKHINFEHR GKPFAFEERV QAFKLADFER MFQKAGLSIS AKFGSYGLEE FDENKSDRLI
LICKKA