Gene Phep_1409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1409 
Symbol 
ID8252509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1675985 
End bp1676719 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content44% 
IMG OID644935062 
Productzinc/iron permease 
Protein accessionYP_003091685 
Protein GI255531313 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0428] Predicted divalent heavy-metal cations transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.257998 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATCT GGAAATTACT CATTTTATTT CTCAGCGCGT TTTTAGGCGG TATAGCCATT 
TTTTTGGTTA AAAGCGACAA ATCCCAGTTA CTGAAATTAA TTCTATCGTT TAGTGGTGCT
TATTTATTTG CCATTACCGT ATTACATCTG ATACCCGACG CCTACAGCGG CCCTGACCAT
AGCGAGATCG GGATATATAT TTTAATCGGG TTCCTGTTAC AGATTTTCCT GGAACAGTTT
TCGGAAGGTG TGGAACACGG ACATATTCAT AAGCACAATG AAAACCAGGC GTTCCCTTAT
GGCATCATGA TCAGTTTGTG CCTGCATGCA TTTTTAGAAG GCATGCCTTT GGCAAAAGAC
CAGCACAATG CCCTGATCTA TGGCATTGCC CTGCACCATA TACCTGCCGC TTTTGCACTG
GCGAGCATTC TTTTGCAGAG CAGGTTTACC AGAAAGAGTA TCGTGTTTTA CATCAGCTTA
TTTGCCATTA TGGCACCCCT CGGCTTTTAT GTAAGCTACG GCATCAGCAA TGGAAGCATT
GGTGGCGTAG AGGCCTATTT TAACAAGATC ATGGGCATTG TGATCGGGAT ATTCTTACAC
ATCTCTACCA CCATCCTGTT TGAGTCGAGT GTTGACCATA AGGTAAGCAG GCGTAAAATG
ATTGCCGTGT TGTGTGGTGT GGCCATTGCC CTTATAGGTT TTTATACCTC AGGTGGGCAT
AGTCATGCAC ATTAA
 
Protein sequence
MEIWKLLILF LSAFLGGIAI FLVKSDKSQL LKLILSFSGA YLFAITVLHL IPDAYSGPDH 
SEIGIYILIG FLLQIFLEQF SEGVEHGHIH KHNENQAFPY GIMISLCLHA FLEGMPLAKD
QHNALIYGIA LHHIPAAFAL ASILLQSRFT RKSIVFYISL FAIMAPLGFY VSYGISNGSI
GGVEAYFNKI MGIVIGIFLH ISTTILFESS VDHKVSRRKM IAVLCGVAIA LIGFYTSGGH
SHAH