Gene Phep_1389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1389 
Symbol 
ID8252489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1655140 
End bp1655988 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content42% 
IMG OID644935042 
Producthypothetical protein 
Protein accessionYP_003091665 
Protein GI255531293 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.918388 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.184903 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAA TGTTTAAAAC CATGCTGGTG CTGGCAATTG CAGCAGCACT GACTAATGAT 
CTTCAGGCGC AGGGCTTAAA AATGCCCCAA CCCAGTACGG CTCAGACCAT TACCCAAAAC
TTTGGTTTAG GTAAGATCAC CCTGAACTAT TCACGCCCCA ATGTTAAAGG CCGCAAGATA
TTTGGCGCTA TGGAACCTTA TGGAACGGTA TGGCGTACCG GCGCAAATTC TGCTACTGTG
ATCAGTTTTA CAGAACCTGT TAAAATTGAA GGTAAAGAAT TGCCTGCCGG AGATTATGGC
TTGTTTACCA TCCCTGGTAA AGATGAGTGG ACAGTGATCT TTAATAAAGG CGCCAAACAA
TGGGGTGCTT ATGAATATAA GGAAGCAGAA GATGTACTGA GGGTAAAAGT TAAAGCCATT
AAATTAAAAG ATAAAGTAGA AACCTTTACC ATGCAGTTTG CAAACGTATT GCCTGCCACT
GCGCAATTGC AGCTAATGTG GGAAAATACG GCTGTAAATG TGGAATTAAG TACTGAAATT
GATGCCACGG TAATGGCAAG TATAGACGAA GCGATGAAAG GCGAGAAAAA ACCTTATTTC
CAGGCTGCCC AATATTACTA TTCGAATGGC AAGGATTTAA ACAAAGCTTT AGAATGGATC
AATGCTGCCG AAGCCGCCGA TGGCAAAGCA CCATGGATTA AATTATGGAA AGGACGCATC
CAGCTGAAAA TGGGTGATAA AGTTGGTGCA ACAAAATCTG CAACTGCTGG ATTGCAGCTG
GCTACAGAAA TGAAAAACCA GGAATATGTG CGCCTGCATA CTGAATTGTT GAACGAAGCA
AAGAAATAG
 
Protein sequence
MKTMFKTMLV LAIAAALTND LQAQGLKMPQ PSTAQTITQN FGLGKITLNY SRPNVKGRKI 
FGAMEPYGTV WRTGANSATV ISFTEPVKIE GKELPAGDYG LFTIPGKDEW TVIFNKGAKQ
WGAYEYKEAE DVLRVKVKAI KLKDKVETFT MQFANVLPAT AQLQLMWENT AVNVELSTEI
DATVMASIDE AMKGEKKPYF QAAQYYYSNG KDLNKALEWI NAAEAADGKA PWIKLWKGRI
QLKMGDKVGA TKSATAGLQL ATEMKNQEYV RLHTELLNEA KK