| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1362 |
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| Symbol | |
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| ID | 8252462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1620435 |
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| End bp | 1623857 |
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| Gene Length | 3423 bp |
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| Protein Length | 1140 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644935016 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003091639 |
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| Protein GI | 255531267 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAATA AATTTTCGAC AATCTATTCA TTCACAATTC AAACTATCCA AATGTATAAA
ATTTATACTA AAATTTTGTG TTGGCCTAAA CGCCGCATTC CCATTCCACT AGTTATGAAA
CTAACTATTT TGCTAATGAC AACAGTTTTG CTCCAGGTAA GTGCAGCCGG GTTTGGGCAA
AAAATTACCT TGTCCAAAAA GGCTGCAACC ATCGAAGCTG TATTTGAAGA AATAACGAAA
CAAACCGGGT ACATGATACT TTGCCAGATG GACATTATCA AAACAGCAGG CGTAAATGAC
ATCAATTATA AGCAAGCCAC AATTGAAGAA GTTTTGGGTA CCTTCTTTCC CCAAAAACGG
CTTTCTTATA CGCTCAAAAA CAAAACCATA ATCATACAAC AGATGGAGCA GGCGGGGCAA
CTTAAAAACA CTGAACCTGC AGCTTTCCGT AATATTGATG TTAACGGTAA GGTTGTTGAT
GAAACCGGGG CTCCTCTTTC GGGTGCATCT ATTATTGTAA AAAACACCAA TCAGGCAATA
TCAACAGACA TCAATGGCAA TTTTTCGTTC AAAAACATAA ATGAGCATAG CATACTGGTT
GTATCTTATC TCAGCTTTAT TACCCAGGAA ATTCCTGTAG CCGGAAAAAC AACCATAAAC
CTCGTACTTA GAGAAAGCAC AAAAGGTTTA AATGAAATTG TGGTGGTTGG TTATGGAACC
CAAAAACGCG GACACATTAC CAGCGCCATA AGTTCCTTCA AGCCAACAGA AAAAAACTCA
AGACCAGTAT TGGGGCCCGA TCAGCTGATA CAGGGAAAAA TGGCCGGGGT AATGGTATCA
TCGGGCTCAG GCAACCTGGG TGGTGCGAAC CGGGTAAGTA TCAGGGGAAT CGGCTCCCTA
AGCGCCAGCA ATGAGCCATT ATATGTGATA GACGGAGTAC CGGTCAGGTC TCACAATGCA
GCGCTGTTCA ATTTCGGAGA AGATATGAAC CCACTTGCCG AACTGAACCC AAATGACATC
GAGTCGGTAG ATGTTTTAAA AGATGCTGCT TCGTCAGCTA TTTATGGATC AAGAGCTACC
AATGGTGTAA TACTCATTAC CACCAAATCC GGAAAAAGCG GAAAATCAAA AATGAATATA
GATGCTTTTT CAGGTATACA GCAGGTACCC CACCTCAGCA AGTTAAAAAT GGCCGATTCA
AAGACCTATG TAAACGTAAT CAATGAAGGT ATAGACAATT ACAACCTTCA ATATGGTTAT
GCACCTGGTG TCGGTAATTT TGTTCCATAC ATCCAAAACC CCTACCCCGG ACTTCCAGAT
ACAGACTGGC TCGATCTGGT ACTGCAAACT GCTAATACCA ACAGCCTTAA CCTGTCTTTT
TCAGGTGGTT CAGACAAGGG CACTTATTTC ATTTCCGGAA GTTACCTGGA CCAGCAGGGT
GCCATAAAAA CAAACAGTCT CAAAAAATAC ACCGCCAAGA TCAATCTCAC CCAGAATGTA
TTTTCATGGC TTAAAGTTGG CGCCAATACC AATATGAGCT ATTCTCATAA CAACAGGGTG
CCAGGTTCAA ACTTAGGCTC AACAGTGCTG GCGCGTGGAT TAGAACAAAG ACCATTTGAC
CGTCCCTATA AACCAGATGG CAACTACTAT GTAGGTGGTA CCTCAGAACT GTTAAGAAAC
AACGCCGTAC AAATCCTTAA CGAACAAAAA GCCTACCTCG ACAACTATCG CTTTTTAGGT
AATTTTTTCG GAGAGCTCAG CTTTACAAAA GACTTAAAAT TCAAATCCTC TGTCGGAACA
GATCTTATCT ATACCCATGA TTATGTCTAT TACAATGAAA ATCACCCTTA CGGAACCGGT
TCTGGAAGGT TGATAGACAA TACCCGGTTA AATACCAATA TCGTATTCGA AAATACATTA
AACTATAACC ATAAATTCGG CGAACTGGAC CTTGCAGTAC TGACCGGCCA TTCCTTCCAG
AAAATCGGGG CTTCAGACAA TTCTGTCGAC GGAAGTGGTT TCCCTTCTGC GTCATTTGAT
GTCAACTCTG TAGCGGCAAC CATCACTGCG GCCTCCACAG GCCTGTCAGA AAATGCACTG
GAGTCCTATT TTAGCCGTGC CAACCTAGCC TATGCAGATA AATATCTGCT ATCAGTTTCT
ATGCGCGCAG ATGGTTCATC CCGTTTTTCC AGGCAAAAAA GATATGGATA TTTTCCCTCT
GTCTCTGCAG GATGGGAACT GTCTAAAGAA AGTTTTTGGA TGCTCTCCGG TACAGATCTT
AAACTCAGAG CCAGCTATGG CAAAACCGGT AACCAGGAAG GTATTGGCAA TTATGCCTAT
CAGGCGCTCG CCGGCGGGGG TTACAACTAC AACAATGCCA GTGGACTGGC CATTACCGGT
TTTGGTAACG ATCAACTTAC CTGGGAGTCT GCAAACCAGT TCAACACGGG TTTAGAGCTC
GGCTTGTTTA AAGGAAAAAT CAACATCACT GCCGATTATT TTGTCAAAAA TACCACCAAC
CTCCTGTACG AAAAACCAAC CGCAGGAACC ACTGGTTTTA CCAGCCTCAC CACCAATATC
GGTTCCATGA AAAATAAAGG CCTTGAATTA GGGATCAATA CCAATTATGC CTTAGGTAAG
GTATTGTGGA ATTCGAACTT CAATATTTCC TTTATCAAAA ACAAACTAAC CTCATTACTC
GGTAATGAAG ACCTGCTTAT CGGTGCAAAC CGCGTACTAA GGGTAGGCAG CGAAGTAGGG
AGCTTCTATA TTTATAAGCA GACCGGTATT TACCAAAGCG ATGCCGAAGT GCCAAAATCT
TTGTACGATA CGGGTATAAG GGCTGGAGAT GTGAAATATG AAGATGTAGA CAACAACGGG
GCTATAGACG TTAAGGATAG GTTAATTGTA GGCTCTTCTA ACCCGGATTT TTTTGGCGGC
TGGGACAATT CTTTTACCTA TGGCAATTTC GACCTTAATT TCTCTGTCAC CTACTCCTAC
GGAGCTGAAG TATATGCCCC ATGGCGCATC AATGTTTCCA GGCTTGCAGG AACCTATTTT
CCTTTTCTTG AAAGCGAAGC CAATGGCAGG TGGACAGGAC CAGGAACCAG CAATACCGTG
CCCAGGGCAA TTAACGGCAA TACCTACAAC ACCTACAACT CTACCCGCTT CCTCGAAAAC
GGATCTTATT TAAGGTTAAG AAACCTGAGC ATTGGCTATA ATCTGCCCAA AACCCTGCTT
TCTAAATTTA AGCTGGAGCG GTTACGGGTT TATGCCCAGG CAGACAACCT GTTCCTGCTT
ACCAGGTATT CGGGCATTGA CCCTGAAGTA AATGACAATA CCGACCCAAA ATTTTTGGGT
GATGATAACC TGGTTATGCC ACAGCTCCGG TCATTTAACC TTGGCTTCAA CCTTACTTTT
TAG
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| Protein sequence | MPNKFSTIYS FTIQTIQMYK IYTKILCWPK RRIPIPLVMK LTILLMTTVL LQVSAAGFGQ
KITLSKKAAT IEAVFEEITK QTGYMILCQM DIIKTAGVND INYKQATIEE VLGTFFPQKR
LSYTLKNKTI IIQQMEQAGQ LKNTEPAAFR NIDVNGKVVD ETGAPLSGAS IIVKNTNQAI
STDINGNFSF KNINEHSILV VSYLSFITQE IPVAGKTTIN LVLRESTKGL NEIVVVGYGT
QKRGHITSAI SSFKPTEKNS RPVLGPDQLI QGKMAGVMVS SGSGNLGGAN RVSIRGIGSL
SASNEPLYVI DGVPVRSHNA ALFNFGEDMN PLAELNPNDI ESVDVLKDAA SSAIYGSRAT
NGVILITTKS GKSGKSKMNI DAFSGIQQVP HLSKLKMADS KTYVNVINEG IDNYNLQYGY
APGVGNFVPY IQNPYPGLPD TDWLDLVLQT ANTNSLNLSF SGGSDKGTYF ISGSYLDQQG
AIKTNSLKKY TAKINLTQNV FSWLKVGANT NMSYSHNNRV PGSNLGSTVL ARGLEQRPFD
RPYKPDGNYY VGGTSELLRN NAVQILNEQK AYLDNYRFLG NFFGELSFTK DLKFKSSVGT
DLIYTHDYVY YNENHPYGTG SGRLIDNTRL NTNIVFENTL NYNHKFGELD LAVLTGHSFQ
KIGASDNSVD GSGFPSASFD VNSVAATITA ASTGLSENAL ESYFSRANLA YADKYLLSVS
MRADGSSRFS RQKRYGYFPS VSAGWELSKE SFWMLSGTDL KLRASYGKTG NQEGIGNYAY
QALAGGGYNY NNASGLAITG FGNDQLTWES ANQFNTGLEL GLFKGKINIT ADYFVKNTTN
LLYEKPTAGT TGFTSLTTNI GSMKNKGLEL GINTNYALGK VLWNSNFNIS FIKNKLTSLL
GNEDLLIGAN RVLRVGSEVG SFYIYKQTGI YQSDAEVPKS LYDTGIRAGD VKYEDVDNNG
AIDVKDRLIV GSSNPDFFGG WDNSFTYGNF DLNFSVTYSY GAEVYAPWRI NVSRLAGTYF
PFLESEANGR WTGPGTSNTV PRAINGNTYN TYNSTRFLEN GSYLRLRNLS IGYNLPKTLL
SKFKLERLRV YAQADNLFLL TRYSGIDPEV NDNTDPKFLG DDNLVMPQLR SFNLGFNLTF
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