| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1335 |
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| Symbol | |
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| ID | 8252435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1589280 |
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| End bp | 1590866 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644934989 |
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| Product | histidine ammonia-lyase |
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| Protein accession | YP_003091612 |
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| Protein GI | 255531240 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2986] Histidine ammonia-lyase |
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| TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.863562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAAAAA TGAGTGCTAA ACAGGTTTTT AATTACGGAT CAGACTTCCT GACGGCCAGT
AAGGCCCTGG AGATCAGCAG GGGTACGATA AGAGGTGTAT TAAATCCGGA TACCCGCATG
AAGGTACAGG AAAGCAGCAG GATAGTGGGC GCAATTGCTT TGGCCGACAA AGCTGTTTAC
GGCATCAATA CAGGCTTTGG TCCGCTGTGT ACCACCATGA TCTCTGCCGA AGATACCCGT
AAATTGCAGG AAAATATTTT AAAGAGCCAT GCTGTAGGCA TTGGTGAACC CATAGATGAA
GAACTCTCGA GATTGATGCT GGTGCTTAAA TTGCATGCCC TGGCTATGGG TTATTCGGGT
ATACAGGAAA ATACGCTGGA CCGGATCATC TGGCATCTGG AATCCGGGGC GATACCTGTG
GTACCTACAC AGGGTTCTGT AGGTGCTTCC GGCGATCTGG CACCTTTATC CCATCTTTTT
CTTCCTTTAA TTGGCCTCGG AAAAGTACAT TATAAAGGGA AGATCATTTC AACAGAAAAG
CTGTTGAAAG AACAGGGGCT GAAACCCATT GTACTGGCCG CAAAAGAAGG GCTGGCCTTA
ATCAATGGTA CACAATTTAT TGCTGCCCAT GCAGTAAAAG TGGTTTCCCG TTTTCATAAT
GTGCTGGCTA CAGCAGATAT TGTTGCAGCA ATGATGCTGG AAGGGTTAAT GGGCTCTGCA
AGACCTTTTG ATGAACAGCT GCACCTGCTG CGGTCATATA AAGGCAACCA GCATGTTGCA
GCCAATATCC GCAATTTGCT TACTGGTTCC GAAATTGTAA ATGCGCATAG AGATTGTGCA
AAAGTACAGG ATCCGTATTC GTTGCGCTGT ATCCCTCAGG TGCATGGTGC TTCAAGGAAC
GCATGGTTAC ATTTAAAAGA AATACTGGAG ACAGAGATCA ATTCGGTAAC AGATAATCCG
GTTATTTTTA GCGAAGAGCT GACCATAAGC GGTGGGAATT TTCATGGGCA GCCTATAGCT
ATGCCCCTGG ATTATGCTTG TTTGGCAGCT TCCGAGATGG GCAACATCTC AGATCGCCGG
ATTTATCTTT CGCTGGAAGG GAATACAGTG GCTGTGCCCA GGCTTTTGAT GCGGGAAACG
GGACTGAATT CAGGATTTAT GATCTTACAA TATACTTCGG CTGCTTTGGC AAGTGAAAAT
AAAGGCCTTT GTTTTCCGGC AAGTGCCGAT AGTATTCCTA CCTCATTGGG GCAGGAAGAC
CATGTAAGTA TGGGTTCTAT TAGTGGGCGT AAGGCACTGC AGGTAATAGA AAATGTAGAA
AAAATATTGG GTATAGAGCT TTTTTGTGCT GCGCAGGCCA TGGATTATCA TGCGCCACTA
AAATCGGGAA AGCTCATCAG CGCCATACAT GATTTTGTAC GTTCAAAAGT TGTTCACCTG
GAGCAGGACC AGATCATGTA TGAAATGATG CAGACAACCA TTGATCTGGT ACAATCAGGA
ACGATCGTAA AGCTGGCCGA AGCTTCTGCG GTTAAAGAAC AGCTGATTTA CAGTACTGCA
TTTCAAACAC AATTTGAAAC ATTTTAG
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| Protein sequence | MVKMSAKQVF NYGSDFLTAS KALEISRGTI RGVLNPDTRM KVQESSRIVG AIALADKAVY
GINTGFGPLC TTMISAEDTR KLQENILKSH AVGIGEPIDE ELSRLMLVLK LHALAMGYSG
IQENTLDRII WHLESGAIPV VPTQGSVGAS GDLAPLSHLF LPLIGLGKVH YKGKIISTEK
LLKEQGLKPI VLAAKEGLAL INGTQFIAAH AVKVVSRFHN VLATADIVAA MMLEGLMGSA
RPFDEQLHLL RSYKGNQHVA ANIRNLLTGS EIVNAHRDCA KVQDPYSLRC IPQVHGASRN
AWLHLKEILE TEINSVTDNP VIFSEELTIS GGNFHGQPIA MPLDYACLAA SEMGNISDRR
IYLSLEGNTV AVPRLLMRET GLNSGFMILQ YTSAALASEN KGLCFPASAD SIPTSLGQED
HVSMGSISGR KALQVIENVE KILGIELFCA AQAMDYHAPL KSGKLISAIH DFVRSKVVHL
EQDQIMYEMM QTTIDLVQSG TIVKLAEASA VKEQLIYSTA FQTQFETF
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