| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1298 |
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| Symbol | |
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| ID | 8252398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1540947 |
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| End bp | 1543736 |
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| Gene Length | 2790 bp |
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| Protein Length | 929 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644934952 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003091575 |
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| Protein GI | 255531203 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0684189 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTAATT ACTACTTGAA AAGAAAAATA GTACGGTTAC TTTTTTTATT GATCCCGGCT
TTAACGCCGG CACTGGTTTT CTCTCAGACA GCTGCCGTAG ACACAAGCCG CGTTTACCTG
CTCAATAAAA GCCAGCAAAA AAGTAACCTG CTCCAATCAA CTGCTACCGT ATATAACGAA
CAGTTGATCA CCACTCCCGC GCCCTCATTT CTACAGGCTT TGCCAGGCAG GTTGTCTGGG
CTGTATACCA GGCAGAGAAG TGGGGTTCAG GCAACGGATG ATCCCATATC GGTAGTTGAT
TTTAAGATCA GGGGCCAGAT ACCTACGATC TTAATTGATG GTGTACCCAG GGATTTCAGT
TCCATAGAAC CCGAATCGAT AGAGTCGGTC ACCATCCTGA AGGATGCTTT GTCTACCGTT
ATGTTTGGTC AGCGTTCCTC AGGTAACATT ATCCAGGTGA TCACTAAAAG ACCTGTAGCT
ACACCATTTA AATTGTCCTT TACTGCCCAG CATGGTCTGC AAAGCATGAT CAATAAGTCT
AAACCTGTTT CTGCTGCAGA TTTTGCCATT CTTTACAATG AAGCCCGTAA TAACGACGGA
CTGGCACCGG TTTACTCCGC TGCCGATATT CTGGCTTACC AGACTGGCTC TGATCCTTTA
TTTCATCCCA ATAACGATTA TAGTAAACTT TTCCTGAACA AAAATGCAGC ATTAGACCGT
TTTAACATCA ACATCAACAG CGGAAATGAA ACTGCCCGTT TTTATGTGGC CATGGATTAC
CAGCGGGAGG GCGGCTTTTT TAATACTGCA GATATCAATA CGTACAATAC CAATTCTGGT
GTAGACCGCT ATATTGTAAG GTCTAACGTG AGTATAGACC TCAATAAAAA CCTGAACATT
GGCCTGAATA TTTTTGGCCG CATCCAGGAT GCCAATCAGC CTGGTGGTAC TACTTCCAGC
ATTTTTTCGG CCATAACTTA TACCCCAAAC AATGCCTACA GTATTTTTAA TCCTGATGGT
TCTTTGGGGG GCAACAGTAC CTTTTCAAAT AACATTTACG GCATGCTCAA CAATTCGGGA
TATCGTAAAT CAAGCGCAAG GGACCTGGCT GCTGATATGG AGGTTACACA AAAGCTAAGT
GATCTGGTAC CGGGTCTATG GGTTAAAGGA AATATTTCCT ATAACAATAC CGTGGTTACC
TCGGTAGACA GGAGCAAAGA TTTTCTGGTG TACAATTTGG ATATTGGCAG TGGAACACCT
GTTTACACAC AAATAGGGAC CAGCAGGGCC CAGTCGACCA CCTTATCTAT AGGTACGCGC
CGTACTTATA CATATGGTAA GTTAAGCCTG GGTTACGATA AAAGTTTTAA CGGGCACAAC
CTGAGCCTGC TGGCTTTGGC TGATAACCAG TCGACCACCG TCAACCTGGA CCTGCCTGCC
AGCTATACCA ATATTGCCGG TAATGCCACC TATAACTTTA AAGAAAAATA TTTTGCTGAA
GCGGCATTGA GCTATGGCGG GCATAACCGC TTTAAACCGG GCAACAGGTT TGGCTTATTT
TATGCCGCAG GCTTAGGTTG GAACCTGGCT AAAGAAGATT TTTTAAAGGA TGTATCCTGG
ATCAGTATCC TTAAGCCACG TATCAATTAT GGCCGCACGG GCAATGCAAA TGTAGGCTAC
TATGTGTACG ATCAATATTA TGATTATGGT GCATCAGCTG CGGCCTATTA TTTTGGCTCA
ACACCAGCCG TTGCCAGGTA TTACAGGGAA CTGCCCCTGG CCAATCCAAA TGCAACCTGG
GAAAAAGCAA ATAAATTAAA TATAGGTTTA GACCTGGAAC TATTTGCCAG TCGATTTAAA
ATTACCTCAG AGTATTTTAA CGACAGCTAT TCCGACCTGA TGCAGAACAG GGGCAAAACG
ATCCAGCTGA TCGGGCAAAC GTACACTGCA GAAAATGTAG GCAAAAACAG GTATAGCGGC
TTTGAGAACA GTGTTTCCTG GAATGATAAA TCGGCCTCCT TCGGTTATTT TGTTTCCGGA
AACATTTCCA TCCTGCAATC TAAGGTGATT TATCAGGACG AGATTTTTCG CCAGTACGAC
TATCAAAAGC GTACCGGTTT ACCTGTAGAC CAGGTTTTTG GTTACCTGGC CGATGGCTTT
TTCCAGTCGC AGGCCGATAT CAATGCCAGC CCTGCGGTAG ATGGTTATAC CCCTGTACCG
GGCGATATTA AATATAAGGA CCTGAATGGG GACGGCATCA TCAACCAGTT TGATGAAACG
GCATTGGGTA CCCAAAAGCC AATGATCTAT TATGGCCTGA CTACCGGTTT TAATGTAAAA
GGCTTTGATC TGAGTATTTC CATCCAGGGG GTGGCTAACC GGGACATTGT GTTTGCCAGT
GGTTACAATT CGGTAGCTGA TGCCAGGGAG TTTGATTTCC AGAACAGCGG CAATGCACAG
GCATTTGAGC AGCATTTAAA CCGCTGGACC CCTGCCAATG CAGCCAATGC CACTTACCCA
AGACTTTCTA TCGGTACCAA TACCAATAAC CAGCGCGCCT CAAGTTTCTG GGTACAGTCT
ATGGCCTACC TGCGCCTGCA AAATGTAGAT CTGGGCTATA CCATACCGGC CAGTTTAACC
AGCAGGATTA AACTGAGCAG TGTGCGTGTT TTTGCAAATG CATTTAACGT ATACTCTTTT
GATAAACTAA ACTATAGCGA CCCGGAAGGT TATAACTCTA TTTTTCCGCT CCGCAGAACG
TTCAATATAG GCCTCAATGT TAAATTATAA
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| Protein sequence | MCNYYLKRKI VRLLFLLIPA LTPALVFSQT AAVDTSRVYL LNKSQQKSNL LQSTATVYNE
QLITTPAPSF LQALPGRLSG LYTRQRSGVQ ATDDPISVVD FKIRGQIPTI LIDGVPRDFS
SIEPESIESV TILKDALSTV MFGQRSSGNI IQVITKRPVA TPFKLSFTAQ HGLQSMINKS
KPVSAADFAI LYNEARNNDG LAPVYSAADI LAYQTGSDPL FHPNNDYSKL FLNKNAALDR
FNININSGNE TARFYVAMDY QREGGFFNTA DINTYNTNSG VDRYIVRSNV SIDLNKNLNI
GLNIFGRIQD ANQPGGTTSS IFSAITYTPN NAYSIFNPDG SLGGNSTFSN NIYGMLNNSG
YRKSSARDLA ADMEVTQKLS DLVPGLWVKG NISYNNTVVT SVDRSKDFLV YNLDIGSGTP
VYTQIGTSRA QSTTLSIGTR RTYTYGKLSL GYDKSFNGHN LSLLALADNQ STTVNLDLPA
SYTNIAGNAT YNFKEKYFAE AALSYGGHNR FKPGNRFGLF YAAGLGWNLA KEDFLKDVSW
ISILKPRINY GRTGNANVGY YVYDQYYDYG ASAAAYYFGS TPAVARYYRE LPLANPNATW
EKANKLNIGL DLELFASRFK ITSEYFNDSY SDLMQNRGKT IQLIGQTYTA ENVGKNRYSG
FENSVSWNDK SASFGYFVSG NISILQSKVI YQDEIFRQYD YQKRTGLPVD QVFGYLADGF
FQSQADINAS PAVDGYTPVP GDIKYKDLNG DGIINQFDET ALGTQKPMIY YGLTTGFNVK
GFDLSISIQG VANRDIVFAS GYNSVADARE FDFQNSGNAQ AFEQHLNRWT PANAANATYP
RLSIGTNTNN QRASSFWVQS MAYLRLQNVD LGYTIPASLT SRIKLSSVRV FANAFNVYSF
DKLNYSDPEG YNSIFPLRRT FNIGLNVKL
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